STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl55Mitochondrial ribosomal protein L55 (Predicted), isoform CRA_b. (127 aa)    
Predicted Functional Partners:
Mrpl46
39S ribosomal protein L46, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL46 family.
   
 
 0.958
Mrpl52
Mitochondrial ribosomal protein L52 (Predicted), isoform CRA_c.
   
 
 0.957
Mrps25
28S ribosomal protein S25, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS25 family.
   
 
 0.956
Mrpl43
Mitochondrial ribosomal protein L43 (Predicted), isoform CRA_b.
   
 
 0.954
Mrps14
Mitochondrial ribosomal protein S14 (Predicted), isoform CRA_b.
   
 
 0.946
Mrpl51
Mitochondrial ribosomal protein L51 (Predicted).
   
 
 0.943
Mrpl12
Mitochondrial ribosomal protein L12.
   
 
 0.924
Mrpl41
39S ribosomal protein L41, mitochondrial; Component of the mitochondrial ribosome large subunit. Also involved in apoptosis and cell cycle. Enhances p53/TP53 stability, thereby contributing to p53/TP53-induced apoptosis in response to growth-inhibitory condition. Enhances p53/TP53 translocation to the mitochondria. Has the ability to arrest the cell cycle at the G1 phase, possibly by stabilizing the CDKN1A and CDKN1B (p27Kip1) proteins.
   
 
 0.921
Mrpl40
39S ribosomal protein L40, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL40 family.
   
 
 0.916
Mrps16
Mitochondrial ribosomal protein S16.
   
   0.914
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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