Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccdc186 | Eipr1 | ENSRNOP00000074637 | ENSRNOP00000056930 | Coiled-coil domain-containing 186. | EARP and GARP complex-interacting protein 1; Acts as a component of endosomal retrieval machinery that is involved in protein transport from early endosomes to either recycling endosomes or the trans-Golgi network. Mediates the recruitment of Golgi-associated retrograde protein (GARP) complex to the trans-Golgi network and controls early endosome-to-Golgi transport of internalized protein. Promotes the recycling of internalized transferrin receptor (TFRC) to the plasma membrane through interaction with endosome- associated recycling protein (EARP) complex. Belongs to the WD repeat EIPR [...] | 0.796 |
Ccdc186 | Hid1 | ENSRNOP00000074637 | ENSRNOP00000004718 | Coiled-coil domain-containing 186. | HID1 domain-containing. | 0.664 |
Eipr1 | Ccdc186 | ENSRNOP00000056930 | ENSRNOP00000074637 | EARP and GARP complex-interacting protein 1; Acts as a component of endosomal retrieval machinery that is involved in protein transport from early endosomes to either recycling endosomes or the trans-Golgi network. Mediates the recruitment of Golgi-associated retrograde protein (GARP) complex to the trans-Golgi network and controls early endosome-to-Golgi transport of internalized protein. Promotes the recycling of internalized transferrin receptor (TFRC) to the plasma membrane through interaction with endosome- associated recycling protein (EARP) complex. Belongs to the WD repeat EIPR [...] | Coiled-coil domain-containing 186. | 0.796 |
Eipr1 | Hid1 | ENSRNOP00000056930 | ENSRNOP00000004718 | EARP and GARP complex-interacting protein 1; Acts as a component of endosomal retrieval machinery that is involved in protein transport from early endosomes to either recycling endosomes or the trans-Golgi network. Mediates the recruitment of Golgi-associated retrograde protein (GARP) complex to the trans-Golgi network and controls early endosome-to-Golgi transport of internalized protein. Promotes the recycling of internalized transferrin receptor (TFRC) to the plasma membrane through interaction with endosome- associated recycling protein (EARP) complex. Belongs to the WD repeat EIPR [...] | HID1 domain-containing. | 0.666 |
Eipr1 | Vps41 | ENSRNOP00000056930 | ENSRNOP00000063448 | EARP and GARP complex-interacting protein 1; Acts as a component of endosomal retrieval machinery that is involved in protein transport from early endosomes to either recycling endosomes or the trans-Golgi network. Mediates the recruitment of Golgi-associated retrograde protein (GARP) complex to the trans-Golgi network and controls early endosome-to-Golgi transport of internalized protein. Promotes the recycling of internalized transferrin receptor (TFRC) to the plasma membrane through interaction with endosome- associated recycling protein (EARP) complex. Belongs to the WD repeat EIPR [...] | Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways. | 0.679 |
Hid1 | Ccdc186 | ENSRNOP00000004718 | ENSRNOP00000074637 | HID1 domain-containing. | Coiled-coil domain-containing 186. | 0.664 |
Hid1 | Eipr1 | ENSRNOP00000004718 | ENSRNOP00000056930 | HID1 domain-containing. | EARP and GARP complex-interacting protein 1; Acts as a component of endosomal retrieval machinery that is involved in protein transport from early endosomes to either recycling endosomes or the trans-Golgi network. Mediates the recruitment of Golgi-associated retrograde protein (GARP) complex to the trans-Golgi network and controls early endosome-to-Golgi transport of internalized protein. Promotes the recycling of internalized transferrin receptor (TFRC) to the plasma membrane through interaction with endosome- associated recycling protein (EARP) complex. Belongs to the WD repeat EIPR [...] | 0.666 |
Hid1 | LOC100911860 | ENSRNOP00000004718 | ENSRNOP00000059419 | HID1 domain-containing. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.612 |
Hid1 | Nup133 | ENSRNOP00000004718 | ENSRNOP00000024182 | HID1 domain-containing. | Nucleoporin 133. | 0.489 |
Hid1 | Nup155 | ENSRNOP00000004718 | ENSRNOP00000074340 | HID1 domain-containing. | Nuclear pore complex protein Nup155; Essential component of nuclear pore complex. Could be essessential for embryogenesis (By similarity). Nucleoporins may be involved both in binding and translocating proteins during nucleocytoplasmic transport. | 0.598 |
Hid1 | Nup54 | ENSRNOP00000004718 | ENSRNOP00000003070 | HID1 domain-containing. | Nuclear pore complex protein Nup54; Component of the nuclear pore complex, a complex required for the trafficking across the nuclear membrane. | 0.550 |
Hid1 | Tm9sf3 | ENSRNOP00000004718 | ENSRNOP00000018043 | HID1 domain-containing. | Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. | 0.536 |
Hid1 | Usp40 | ENSRNOP00000004718 | ENSRNOP00000060806 | HID1 domain-containing. | Ubiquitin-specific peptidase 40; Belongs to the peptidase C19 family. | 0.612 |
Hid1 | Usp7 | ENSRNOP00000004718 | ENSRNOP00000041134 | HID1 domain-containing. | Ubiquitin carboxyl-terminal hydrolase 7; Hydrolase that deubiquitinates target proteins such as FOXO4, p53/TP53, MDM2, ERCC6, DNMT1, UHRF1, PTEN, KMT2E/MLL5 and DAXX. Together with DAXX, prevents MDM2 self-ubiquitination and enhances the E3 ligase activity of MDM2 towards p53/TP53, thereby promoting p53/TP53 ubiquitination and proteasomal degradation (By similarity). Deubiquitinates p53/TP53, preventing degradation of p53/TP53, and enhances p53/TP53-dependent transcription regulation, cell growth repression and apoptosis (By similarity). Deubiquitinates p53/TP53 and MDM2 and strongly s [...] | 0.612 |
Hid1 | Vps41 | ENSRNOP00000004718 | ENSRNOP00000063448 | HID1 domain-containing. | Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways. | 0.696 |
LOC100911860 | Hid1 | ENSRNOP00000059419 | ENSRNOP00000004718 | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | HID1 domain-containing. | 0.612 |
Nup133 | Hid1 | ENSRNOP00000024182 | ENSRNOP00000004718 | Nucleoporin 133. | HID1 domain-containing. | 0.489 |
Nup133 | Nup155 | ENSRNOP00000024182 | ENSRNOP00000074340 | Nucleoporin 133. | Nuclear pore complex protein Nup155; Essential component of nuclear pore complex. Could be essessential for embryogenesis (By similarity). Nucleoporins may be involved both in binding and translocating proteins during nucleocytoplasmic transport. | 0.993 |
Nup133 | Nup54 | ENSRNOP00000024182 | ENSRNOP00000003070 | Nucleoporin 133. | Nuclear pore complex protein Nup54; Component of the nuclear pore complex, a complex required for the trafficking across the nuclear membrane. | 0.988 |
Nup155 | Hid1 | ENSRNOP00000074340 | ENSRNOP00000004718 | Nuclear pore complex protein Nup155; Essential component of nuclear pore complex. Could be essessential for embryogenesis (By similarity). Nucleoporins may be involved both in binding and translocating proteins during nucleocytoplasmic transport. | HID1 domain-containing. | 0.598 |
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