STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem163Transmembrane protein 163; May bind zinc and other divalent cations and recruit them to vesicular organelles. (288 aa)    
Predicted Functional Partners:
Olr510
Olfactory receptor.
      
 0.660
Tmem191c
Transmembrane protein 191C.
      
 0.570
B3gnt8
Hexosyltransferase.
      
 0.570
Tmem221
Transmembrane protein 221.
      
 0.534
Gpr137c
G protein-coupled receptor 137C.
   
  
 0.521
Tmem171
Transmembrane protein 171.
      
 0.497
Ust5r
Integral membrane transport protein UST5r.
      
 0.476
Zfp68
Zinc finger protein 68 (Predicted), isoform CRA_a.
      
 0.473
UST4r
Integral membrane transport protein UST4r.
      
 0.470
Tmem211
Transmembrane protein 211.
      
 0.465
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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