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Rbm43 protein (Rattus norvegicus) - STRING interaction network
"Rbm43" - RNA binding motif protein 43 in Rattus norvegicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rbm43RNA binding motif protein 43 (343 aa)    
Predicted Functional Partners:
H2afy
Core histone macro-H2A.1; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes where it represses transcription. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post- translational modifications of histones, also called histone code, and nucleosome remodeling. Involved in stable X chromosome inactivatio [...] (371 aa)
     
 
  0.640
H2afy2
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes (372 aa)
     
 
  0.640
Rnf144b
IBR domain containing 2 (Predicted), isoform CRA_a; Ring finger protein 144B (301 aa)
           
  0.638
Iqsec3
IQ motif and SEC7 domain-containing protein 3; Acts as a guanine nucleotide exchange factor (GEF) for ARF1 (1194 aa)
           
  0.623
Kdm1a
Lysine (K)-specific demethylase 1A (760 aa)
     
      0.622
Uba52
Ubiquitin-60S ribosomal protein L40; Ubiquitin- Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked- Lys-6-linked may be invo [...] (128 aa)
       
      0.595
Rnd3
Rho-related GTP-binding protein RhoE; Binds GTP but lacks intrinsic GTPase activity and is resistant to Rho-specific GTPase-activating proteins (244 aa)
       
 
  0.540
Rbpms2
RNA binding protein with multiple splicing 2 (210 aa)
     
   
  0.536
Asf1b
ASF1 anti-silencing function 1 homolog B (S. cerevisiae) (Predicted); Anti-silencing function 1B histone chaperone (202 aa)
     
 
  0.513
Asf1a
ASF1 anti-silencing function 1 homolog A (S. cerevisiae) (Predicted), isoform CRA_a; Anti-silencing function 1A histone chaperone (204 aa)
     
 
  0.513
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Gunn rats, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus norvegicus, Rattus rattiscus, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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