STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dipk1bDivergent protein kinase domain 1B; Belongs to the DIPK family. (431 aa)    
Predicted Functional Partners:
RGD1565616
RGD1565616.
   
  
 0.780
Ggta1l1
N-acetyllactosaminide alpha-1,3-galactosyltransferase-like 1; Synthesizes the galactose-alpha(1,3)-galactose group by catalyzing the transfer of a galactose residue, with an alpha-1,3 linkage, on terminal lactosaminide (Gal-beta-1,4-GlcNAc-R) disaccharide borne by a glycoprotein or a glycolipid.
      
 0.747
MGC94199
Protein C8orf37 homolog; May be involved in photoreceptor outer segment disk morphogenesis (By similarity).
      
 0.733
MGC94199-2
Similar to RIKEN cDNA 2610301B20; EST AI428449.
      
 0.733
Snapc4
Small nuclear RNA-activating complex, polypeptide 4.
   
  
 0.698
Surf6
Surfeit 6.
      
 0.692
Abo3
Histo-blood group ABO system transferase 1; Posseses strong A transferase activity and a weak B transferase activity.
      
 0.633
Lcn6
Epididymal-specific lipocalin ELP16; Belongs to the calycin superfamily. Lipocalin family.
      
 0.630
Ak8
Adenylate kinase 8; Nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has highest activity toward AMP, and weaker activity toward dAMP, CMP and dCMP. Also displays broad nucleoside diphosphate kinase activity.
   
  
 0.627
Mrps2
Mitochondrial ribosomal protein S2.
   
  
 0.592
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.