STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AardAlanine and arginine-rich domain-containing protein. (165 aa)    
Predicted Functional Partners:
Spata32
Spermatogenesis-associated protein 32.
   
  
 0.796
RGD1304624
Similar to RIKEN cDNA 2700097O09 (Predicted).
      
 0.533
Iqub
IQ and ubiquitin-like domain-containing protein; May play roles in cilia formation and/or maintenance.
      
 0.469
Taf7l
TATA-box-binding protein-associated factor 7-like.
   
  
 0.440
Zfp608
Zinc finger protein 608 (Predicted), isoform CRA_b.
      
 0.438
Dlec1
Deleted in lung and esophageal cancer protein 1 homolog; May act as a tumor suppressor by inhibiting cell proliferation.
      
 0.426
Upk3b
Uroplakin 3B.
      
 0.421
Tsx
Testis-specific protein TSX; May have an RNA/DNA binding role.
   
  
 0.416
Lrrc72
Leucine rich repeat containing 72.
      
 0.400
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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