STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdkn2aipnlCDKN2AIP N-terminal-like protein. (116 aa)    
Predicted Functional Partners:
RGD1310352
Similar to HTGN29 protein; keratinocytes associated transmembrane protein 2, isoform CRA_a.
   
  
 0.570
Mrnip
Similar to RIKEN cDNA 3010026O09 (Predicted), isoform CRA_b.
   
  
 0.555
Cabcoco1
Ciliary-associated calcium-binding coiled-coil 1.
      
 0.548
RGD1563917
Similar to Nuclear autoantigen Sp-100 (Speckled 100 kDa).
      
 0.548
RGD1564308
Similar to LOC495042 protein (Predicted).
      
 0.547
Tmem184c
Transmembrane protein 184C; Possible tumor suppressor which may play a role in cell growth; Belongs to the TMEM184 family.
   
  
 0.426
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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