Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Crip2 | Dok4 | ENSRNOP00000006804 | ENSRNOP00000021037 | Cysteine-rich protein 2. | Docking protein 4 (Predicted). | 0.407 |
Crip2 | Nrip2 | ENSRNOP00000006804 | ENSRNOP00000052737 | Cysteine-rich protein 2. | Nuclear receptor-interacting protein 2. | 0.401 |
Crip2 | Ptpn13 | ENSRNOP00000006804 | ENSRNOP00000057876 | Cysteine-rich protein 2. | Tyrosine-protein phosphatase non-receptor type 13; Regulates negatively FAS-induced apoptosis and NGFR-mediated pro-apoptotic signaling. | 0.502 |
Crip2 | Srf | ENSRNOP00000006804 | ENSRNOP00000058149 | Cysteine-rich protein 2. | Similar to serum response factor (Predicted). | 0.635 |
Crip2 | Vim | ENSRNOP00000006804 | ENSRNOP00000024430 | Cysteine-rich protein 2. | Vimentin; Vimentins are class-III intermediate filaments found in various non-epithelial cells, especially mesenchymal cells. Vimentin is attached to the nucleus, endoplasmic reticulum, and mitochondria, either laterally or terminally. | 0.408 |
Dok4 | Crip2 | ENSRNOP00000021037 | ENSRNOP00000006804 | Docking protein 4 (Predicted). | Cysteine-rich protein 2. | 0.407 |
Nrip2 | Crip2 | ENSRNOP00000052737 | ENSRNOP00000006804 | Nuclear receptor-interacting protein 2. | Cysteine-rich protein 2. | 0.401 |
Ptpn13 | Crip2 | ENSRNOP00000057876 | ENSRNOP00000006804 | Tyrosine-protein phosphatase non-receptor type 13; Regulates negatively FAS-induced apoptosis and NGFR-mediated pro-apoptotic signaling. | Cysteine-rich protein 2. | 0.502 |
Srf | Crip2 | ENSRNOP00000058149 | ENSRNOP00000006804 | Similar to serum response factor (Predicted). | Cysteine-rich protein 2. | 0.635 |
Vim | Crip2 | ENSRNOP00000024430 | ENSRNOP00000006804 | Vimentin; Vimentins are class-III intermediate filaments found in various non-epithelial cells, especially mesenchymal cells. Vimentin is attached to the nucleus, endoplasmic reticulum, and mitochondria, either laterally or terminally. | Cysteine-rich protein 2. | 0.408 |