STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RGD1306474Similar to RIKEN cDNA 9530003J23 (Predicted), isoform CRA_a; Belongs to the glycosyl hydrolase 22 family. (151 aa)    
Predicted Functional Partners:
Lyzl1
Lysozyme-like 1 (Predicted); Belongs to the glycosyl hydrolase 22 family.
  
 
 
0.906
Lyz2
Lysozyme C-1; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. In the intestine they may also have a digestive function.
  
  
0.903
Lcn1
Von Ebner gland protein 1; Could play a role in taste reception. Could be necessary for the concentration and delivery of sapid molecules in the gustatory system.
   
  
 0.661
Fdcsp
Follicular dendritic cell secreted peptide.
      
 0.437
Csap1
Common salivary protein 1.
   
 
 0.428
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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