Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Agap3 | Efr3a | ENSRNOP00000072199 | ENSRNOP00000048877 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 3. | Similar to RIKEN cDNA C920006C10 (Predicted). | 0.549 |
Agap3 | Necab1 | ENSRNOP00000072199 | ENSRNOP00000009718 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 3. | N-terminal EF-hand calcium-binding protein 1. | 0.540 |
Agap3 | Wdr90 | ENSRNOP00000072199 | ENSRNOP00000027121 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 3. | WD repeat domain 90. | 0.666 |
Ctxn1 | Necab1 | ENSRNOP00000001399 | ENSRNOP00000009718 | Cortexin-1; May mediate extracellular or intracellular signaling of cortical neurons during forebrain development. | N-terminal EF-hand calcium-binding protein 1. | 0.577 |
Efr3a | Agap3 | ENSRNOP00000048877 | ENSRNOP00000072199 | Similar to RIKEN cDNA C920006C10 (Predicted). | ArfGAP with GTPase domain, ankyrin repeat and PH domain 3. | 0.549 |
Efr3a | Necab1 | ENSRNOP00000048877 | ENSRNOP00000009718 | Similar to RIKEN cDNA C920006C10 (Predicted). | N-terminal EF-hand calcium-binding protein 1. | 0.606 |
Efr3a | Wdr90 | ENSRNOP00000048877 | ENSRNOP00000027121 | Similar to RIKEN cDNA C920006C10 (Predicted). | WD repeat domain 90. | 0.687 |
Klhl32 | Necab1 | ENSRNOP00000045360 | ENSRNOP00000009718 | Kelch-like family member 32. | N-terminal EF-hand calcium-binding protein 1. | 0.555 |
LOC103689978 | Necab1 | ENSRNOP00000035285 | ENSRNOP00000009718 | SUMO-specific peptidase 5. | N-terminal EF-hand calcium-binding protein 1. | 0.532 |
LOC103689978 | Soga3 | ENSRNOP00000035285 | ENSRNOP00000016712 | SUMO-specific peptidase 5. | SOGA family member 3. | 0.420 |
Mien1 | Necab1 | ENSRNOP00000009485 | ENSRNOP00000009718 | Similar to RIKEN cDNA 1810046J19 (Predicted). | N-terminal EF-hand calcium-binding protein 1. | 0.564 |
Necab1 | Agap3 | ENSRNOP00000009718 | ENSRNOP00000072199 | N-terminal EF-hand calcium-binding protein 1. | ArfGAP with GTPase domain, ankyrin repeat and PH domain 3. | 0.540 |
Necab1 | Ctxn1 | ENSRNOP00000009718 | ENSRNOP00000001399 | N-terminal EF-hand calcium-binding protein 1. | Cortexin-1; May mediate extracellular or intracellular signaling of cortical neurons during forebrain development. | 0.577 |
Necab1 | Efr3a | ENSRNOP00000009718 | ENSRNOP00000048877 | N-terminal EF-hand calcium-binding protein 1. | Similar to RIKEN cDNA C920006C10 (Predicted). | 0.606 |
Necab1 | Klhl32 | ENSRNOP00000009718 | ENSRNOP00000045360 | N-terminal EF-hand calcium-binding protein 1. | Kelch-like family member 32. | 0.555 |
Necab1 | LOC103689978 | ENSRNOP00000009718 | ENSRNOP00000035285 | N-terminal EF-hand calcium-binding protein 1. | SUMO-specific peptidase 5. | 0.532 |
Necab1 | Mien1 | ENSRNOP00000009718 | ENSRNOP00000009485 | N-terminal EF-hand calcium-binding protein 1. | Similar to RIKEN cDNA 1810046J19 (Predicted). | 0.564 |
Necab1 | Necab2 | ENSRNOP00000009718 | ENSRNOP00000020341 | N-terminal EF-hand calcium-binding protein 1. | N-terminal EF-hand calcium-binding protein 2; May act as a signaling scaffold protein that senses intracellular calcium. Can modulate ligand-induced internalization of ADORA2A and coupling efficiency of mGluR5/GRM5; for both receptors may regulate signaling activity such as promoting MAPK1/3 (ERK1/2) activation. | 0.555 |
Necab1 | Pcdhgb5 | ENSRNOP00000009718 | ENSRNOP00000057212 | N-terminal EF-hand calcium-binding protein 1. | Protocadherin gamma subfamily B, 5. | 0.543 |
Necab1 | Soga3 | ENSRNOP00000009718 | ENSRNOP00000016712 | N-terminal EF-hand calcium-binding protein 1. | SOGA family member 3. | 0.597 |
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