STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zmynd19Zinc finger MYND domain-containing protein 19; May be involved as a regulatory molecule in GPR24/MCH-R1 signaling. (227 aa)    
Predicted Functional Partners:
Yipf1
Protein YIPF1; Belongs to the YIP1 family.
   
  
 0.729
Ttc14
Tetratricopeptide repeat domain 14 (Predicted), isoform CRA_c.
   
 
 0.699
Rsrc2
Arginine/serine-rich coiled-coil protein 2; Belongs to the RSRC2 family.
   
  
 0.698
Ccdc28a
Coiled-coil domain-containing 28A.
      
 0.695
Tbc1d31
TBC1 domain family, member 31.
      
 0.693
Tmem140
Transmembrane protein 140.
      
 0.669
Eif4enif1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
      
 0.660
Magee1
Melanoma-associated antigen E1; May enhance ubiquitin ligase activity of RING-type zinc finger-containing E3 ubiquitin-protein ligases. Proposed to act through recruitment and/or stabilization of the Ubl-conjugating enzyme (E2) at the E3:substrate complex (By similarity).
      
 0.660
Tmem168
Transmembrane protein 168.
      
 0.660
Rmnd5a
Required for meiotic nuclear division 5 homolog A.
    
 
 0.658
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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