STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acrv1Acrosomal vesicle protein 1. (267 aa)    
Predicted Functional Partners:
LOC691311
Hypothetical protein LOC691311.
   
    0.778
Sp9
Sp9 transcription factor.
    
 
 0.771
Sp6
Sp6 transcription factor.
    
 
 0.757
Mbd3l2
Uncharacterized protein.
   
  
 0.737
RGD1304554
LOC363043 (Predicted).
   
  
 0.698
A0A0G2JXE3_RAT
Uncharacterized protein.
   
    0.683
LOC171573
Secreted seminal-vesicle Ly-6 protein 1.
   
  
 0.646
Dbil5
Diazepam-binding inhibitor-like 5; May be involved in the energy metabolism of the mature sperm. Belongs to the ACBP family.
   
 
 0.632
Izumo3
IZUMO family member 3.
   
  
 0.630
Akap4
A-kinase anchor protein 4; Major structural component of sperm fibrous sheath. May play a role in sperm motility (By similarity).
   
  
 0.597
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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