STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem176bTransmembrane protein 176B; Required for the development of cerebellar granule cells (By similarity). May play a role in the process of maturation of dendritic cells. (263 aa)    
Predicted Functional Partners:
Tmem176a
Transmembrane protein 176A.
  
 
0.977
Gimap9
GTPase, IMAP family member 9.
   
 
 0.601
Ms4a18
Membrane spanning 4-domains A18.
      
 0.570
Mtrex
Mtr4 exosome RNA helicase.
   
 
 0.556
Gimap1
GTPase, IMAP family member 1, isoform CRA_a.
   
 
 0.551
Cpxm1
Carboxypeptidase X 1 (M14 family) (Predicted).
   
  
 0.529
Ms4a6e-2
Membrane-spanning 4-domains, subfamily A, member 6B.
   
  
 0.497
Samd10
Sterile alpha motif domain-containing 10.
      
 0.484
Tmem252
Transmembrane protein 252.
   
  
 0.483
Ms4a6e
Membrane spanning 4-domains A6E.
   
  
 0.481
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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