Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Foxl2 | Rbms1 | ENSRNOP00000023091 | ENSRNOP00000011682 | Forkhead box L2. | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | 0.432 |
| Gcfc2 | Hunk | ENSRNOP00000009104 | ENSRNOP00000002866 | GC-rich sequence DNA-binding factor 2. | Hormonally upregulated Neu-associated kinase. | 0.464 |
| Gcfc2 | Prrc2b | ENSRNOP00000009104 | ENSRNOP00000063117 | GC-rich sequence DNA-binding factor 2. | Proline-rich coiled-coil 2B. | 0.501 |
| Gcfc2 | Rbms1 | ENSRNOP00000009104 | ENSRNOP00000011682 | GC-rich sequence DNA-binding factor 2. | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | 0.421 |
| Hunk | Gcfc2 | ENSRNOP00000002866 | ENSRNOP00000009104 | Hormonally upregulated Neu-associated kinase. | GC-rich sequence DNA-binding factor 2. | 0.464 |
| Hunk | Prrc2b | ENSRNOP00000002866 | ENSRNOP00000063117 | Hormonally upregulated Neu-associated kinase. | Proline-rich coiled-coil 2B. | 0.431 |
| Hunk | Rbms1 | ENSRNOP00000002866 | ENSRNOP00000011682 | Hormonally upregulated Neu-associated kinase. | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | 0.479 |
| Mrpl43 | Rbms1 | ENSRNOP00000020020 | ENSRNOP00000011682 | Mitochondrial ribosomal protein L43 (Predicted), isoform CRA_b. | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | 0.418 |
| Myc | Rbms1 | ENSRNOP00000006188 | ENSRNOP00000011682 | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. Binds to the VEGFA promoter, promoting VEGFA production and subsequent sprouting angiogenesis (By similarity). Regulator of somatic reprogramming, controls self-renewal of embryonic stem cells. Functions with TAF6L to activate target gene expression through RNA polymerase II pause release (By similarity). | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | 0.538 |
| Nostrin | Rbms1 | ENSRNOP00000062066 | ENSRNOP00000011682 | Nostrin; Multivalent adapter protein which may decrease NOS3 activity by inducing its translocation away from the plasma membrane. | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | 0.452 |
| Pdlim5 | Rbms1 | ENSRNOP00000022387 | ENSRNOP00000011682 | PDZ and LIM domain protein 5; May play an important role in the heart development by scaffolding PKC to the Z-disk region. May play a role in the regulation of cardiomyocyte expansion. Isoforms lacking the LIM domains may negatively modulate the scaffolding activity of isoform 1. Overexpression promotes the development of heart hypertrophy. Contributes to the regulation of dendritic spine morphogenesis in neurons. May be required to restrain postsynaptic growth of excitatory synapses. Isoform 1, but not isoform 2, expression favors spine thinning and elongation. | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | 0.477 |
| Pdlim5 | Stard8 | ENSRNOP00000022387 | ENSRNOP00000070263 | PDZ and LIM domain protein 5; May play an important role in the heart development by scaffolding PKC to the Z-disk region. May play a role in the regulation of cardiomyocyte expansion. Isoforms lacking the LIM domains may negatively modulate the scaffolding activity of isoform 1. Overexpression promotes the development of heart hypertrophy. Contributes to the regulation of dendritic spine morphogenesis in neurons. May be required to restrain postsynaptic growth of excitatory synapses. Isoform 1, but not isoform 2, expression favors spine thinning and elongation. | StAR-related lipid transfer domain-containing 8. | 0.411 |
| Prrc2b | Gcfc2 | ENSRNOP00000063117 | ENSRNOP00000009104 | Proline-rich coiled-coil 2B. | GC-rich sequence DNA-binding factor 2. | 0.501 |
| Prrc2b | Hunk | ENSRNOP00000063117 | ENSRNOP00000002866 | Proline-rich coiled-coil 2B. | Hormonally upregulated Neu-associated kinase. | 0.431 |
| Prrc2b | Rbms1 | ENSRNOP00000063117 | ENSRNOP00000011682 | Proline-rich coiled-coil 2B. | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | 0.417 |
| Rbms1 | Foxl2 | ENSRNOP00000011682 | ENSRNOP00000023091 | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | Forkhead box L2. | 0.432 |
| Rbms1 | Gcfc2 | ENSRNOP00000011682 | ENSRNOP00000009104 | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | GC-rich sequence DNA-binding factor 2. | 0.421 |
| Rbms1 | Hunk | ENSRNOP00000011682 | ENSRNOP00000002866 | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | Hormonally upregulated Neu-associated kinase. | 0.479 |
| Rbms1 | Mrpl43 | ENSRNOP00000011682 | ENSRNOP00000020020 | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | Mitochondrial ribosomal protein L43 (Predicted), isoform CRA_b. | 0.418 |
| Rbms1 | Myc | ENSRNOP00000011682 | ENSRNOP00000006188 | RNA-binding motif, single-stranded-interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity). | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. Binds to the VEGFA promoter, promoting VEGFA production and subsequent sprouting angiogenesis (By similarity). Regulator of somatic reprogramming, controls self-renewal of embryonic stem cells. Functions with TAF6L to activate target gene expression through RNA polymerase II pause release (By similarity). | 0.538 |
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