STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Yipf2Protein YIPF2; Belongs to the YIP1 family. (311 aa)    
Predicted Functional Partners:
Yipf4
Protein YIPF4; Involved in the maintenance of the Golgi structure.
   
 
 0.925
Yipf7
Protein YIPF.
   
 
 0.878
Yipf3
Protein YIPF3; Involved in the maintenance of the Golgi structure. May play a role in hematopoiesis (By similarity).
   
  
 0.870
Yipf6
Protein YIPF6; May be required for stable YIPF1 and YIPF2 protein expression.
   
 
 0.867
Yipf5
Protein YIPF5; Plays a role in transport between endoplasmic reticulum and Golgi.
   
 
 0.815
LOC103689986
Protein YIF1B.
   
  
 0.774
Yif1b
Protein YIF1B.
   
  
 0.774
Zbtb24
Zinc finger and BTB domain-containing protein 24; May be involved in BMP2-induced transcription. Belongs to the krueppel C2H2-type zinc-finger protein family.
   
  
 0.701
Slc38a7
Putative sodium-coupled neutral amino acid transporter 7; Mediates sodium-dependent transport of amino acids, preferentially L-glutamine; Belongs to the amino acid/polyamine transporter 2 family.
      
 0.666
Slc39a7
Solute carrier family 39 (Zinc transporter), member 7.
   
  
 0.596
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.