Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cd44 | Itga1 | ENSRNOP00000009000 | ENSRNOP00000074337 | CD44 antigen. | Integrin alpha-1; Integrin alpha-1/beta-1 is a receptor for laminin and collagen. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in collagen. Involved in anchorage-dependent, negative regulation of EGF-stimulated cell growth (By similarity). | 0.556 |
Cd44 | Itga5 | ENSRNOP00000009000 | ENSRNOP00000071805 | CD44 antigen. | Integrin alpha 5 (Mapped); Belongs to the integrin alpha chain family. | 0.717 |
Cd44 | Lama1 | ENSRNOP00000009000 | ENSRNOP00000023224 | CD44 antigen. | Laminin subunit alpha 1. | 0.941 |
Cd44 | Lama2 | ENSRNOP00000009000 | ENSRNOP00000014917 | CD44 antigen. | Laminin subunit alpha 2. | 0.919 |
Cd44 | Lamb1 | ENSRNOP00000009000 | ENSRNOP00000008321 | CD44 antigen. | Laminin subunit beta 1. | 0.920 |
Cd44 | Lamc1 | ENSRNOP00000009000 | ENSRNOP00000003605 | CD44 antigen. | Laminin subunit gamma 1. | 0.922 |
Cd44 | Lamc2 | ENSRNOP00000009000 | ENSRNOP00000037099 | CD44 antigen. | Laminin subunit gamma 2. | 0.941 |
Dag1 | Lama1 | ENSRNOP00000026327 | ENSRNOP00000023224 | Dystroglycan 1. | Laminin subunit alpha 1. | 0.929 |
Dag1 | Lama2 | ENSRNOP00000026327 | ENSRNOP00000014917 | Dystroglycan 1. | Laminin subunit alpha 2. | 0.993 |
Dag1 | Lamb1 | ENSRNOP00000026327 | ENSRNOP00000008321 | Dystroglycan 1. | Laminin subunit beta 1. | 0.784 |
Dag1 | Lamc1 | ENSRNOP00000026327 | ENSRNOP00000003605 | Dystroglycan 1. | Laminin subunit gamma 1. | 0.803 |
Dag1 | Lamc2 | ENSRNOP00000026327 | ENSRNOP00000037099 | Dystroglycan 1. | Laminin subunit gamma 2. | 0.781 |
Itga1 | Cd44 | ENSRNOP00000074337 | ENSRNOP00000009000 | Integrin alpha-1; Integrin alpha-1/beta-1 is a receptor for laminin and collagen. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in collagen. Involved in anchorage-dependent, negative regulation of EGF-stimulated cell growth (By similarity). | CD44 antigen. | 0.556 |
Itga1 | Itga5 | ENSRNOP00000074337 | ENSRNOP00000071805 | Integrin alpha-1; Integrin alpha-1/beta-1 is a receptor for laminin and collagen. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in collagen. Involved in anchorage-dependent, negative regulation of EGF-stimulated cell growth (By similarity). | Integrin alpha 5 (Mapped); Belongs to the integrin alpha chain family. | 0.827 |
Itga1 | Itga7 | ENSRNOP00000074337 | ENSRNOP00000028983 | Integrin alpha-1; Integrin alpha-1/beta-1 is a receptor for laminin and collagen. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in collagen. Involved in anchorage-dependent, negative regulation of EGF-stimulated cell growth (By similarity). | Integrin alpha-7 70 kDa form; Integrin alpha-7/beta-1 is the primary laminin receptor on skeletal myoblasts and adult myofibers. During myogenic differentiation, it may induce changes in the shape and mobility of myoblasts, and facilitate their localization at laminin-rich sites of secondary fiber formation. Involved in the maintenance of the myofibers cytoarchitecture as well as for their anchorage, viability and functional integrity. Required to promote contractile phenotype acquisition in differentiated airway smooth muscle (ASM) cells (By similarity). Acts as Schwann cell receptor [...] | 0.772 |
Itga1 | Itga8 | ENSRNOP00000074337 | ENSRNOP00000022713 | Integrin alpha-1; Integrin alpha-1/beta-1 is a receptor for laminin and collagen. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in collagen. Involved in anchorage-dependent, negative regulation of EGF-stimulated cell growth (By similarity). | Integrin subunit alpha 8; Belongs to the integrin alpha chain family. | 0.658 |
Itga1 | Lama1 | ENSRNOP00000074337 | ENSRNOP00000023224 | Integrin alpha-1; Integrin alpha-1/beta-1 is a receptor for laminin and collagen. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in collagen. Involved in anchorage-dependent, negative regulation of EGF-stimulated cell growth (By similarity). | Laminin subunit alpha 1. | 0.778 |
Itga1 | Lama2 | ENSRNOP00000074337 | ENSRNOP00000014917 | Integrin alpha-1; Integrin alpha-1/beta-1 is a receptor for laminin and collagen. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in collagen. Involved in anchorage-dependent, negative regulation of EGF-stimulated cell growth (By similarity). | Laminin subunit alpha 2. | 0.823 |
Itga1 | Lamb1 | ENSRNOP00000074337 | ENSRNOP00000008321 | Integrin alpha-1; Integrin alpha-1/beta-1 is a receptor for laminin and collagen. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in collagen. Involved in anchorage-dependent, negative regulation of EGF-stimulated cell growth (By similarity). | Laminin subunit beta 1. | 0.834 |
Itga1 | Lamc1 | ENSRNOP00000074337 | ENSRNOP00000003605 | Integrin alpha-1; Integrin alpha-1/beta-1 is a receptor for laminin and collagen. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in collagen. Involved in anchorage-dependent, negative regulation of EGF-stimulated cell growth (By similarity). | Laminin subunit gamma 1. | 0.786 |
page 1 of 5