STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZfrZinc finger RNA-binding protein; Involved in postimplantation and gastrulation stages of development (By similarity). Binds to DNA and RNA (By similarity). Involved in the nucleocytoplasmic shuttling of STAU2 (1073 aa)    
Predicted Functional Partners:
Ilf2
Interleukin enhancer-binding factor 2; Appears to function predominantly as a heterodimeric complex with ILF3. This complex may regulate transcription of the IL2 gene during T-cell activation. It can also promote the formation of stable DNA-dependent protein kinase holoenzyme complexes on DNA (By similarity). Essential for the efficient reshuttling of ILF3 into the nucleus (By similarity)
   
 
0.909
Ubap2
Ubiquitin-associated protein 2
   
 
 0.753
Gga1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1
      
 0.737
Zmym2
Zinc finger, MYM-type 2
   
  
 0.697
Nanos2
Nanos C2HC-type zinc finger 2; Nanos homolog 2 (Drosophila); Belongs to the nanos family
      
 0.676
Fyttd1
UAP56-interacting factor; Required for mRNA export from the nucleus to the cytoplasm. Acts as an adapter that uses the DDX39B/UAP56-NFX1 pathway to ensure efficient mRNA export and delivering to the nuclear pore. Associates with spliced and unspliced mRNAs simultaneously with ALYREF/THOC4 (By similarity)
   
    0.672
Zfpl1
Zinc finger protein-like 1
      
 0.672
Hnrnpr
Heterogeneous nuclear ribonucleoprotein R
   
 
 0.656
Ddx3x
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
   
 
 0.656
ENSRNOG00000048337
Uncharacterized protein
   
 
 0.630
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Gunn rats, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus norvegicus, Rattus rattiscus, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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