Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Echdc1 | Soga3 | ENSRNOP00000015440 | ENSRNOP00000016712 | Ethylmalonyl-CoA decarboxylase; Decarboxylates ethylmalonyl-CoA, a potentially toxic metabolite, to form butyryl-CoA, suggesting it might be involved in metabolite proofreading. Also has methylmalonyl-CoA decarboxylase activity at lower level; Belongs to the enoyl-CoA hydratase/isomerase family. | SOGA family member 3. | 0.513 |
Edem3 | Pcdhgb5 | ENSRNOP00000017858 | ENSRNOP00000057212 | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | Protocadherin gamma subfamily B, 5. | 0.439 |
Edem3 | Soga3 | ENSRNOP00000017858 | ENSRNOP00000016712 | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | SOGA family member 3. | 0.477 |
Necab1 | Pcdhga8 | ENSRNOP00000009718 | ENSRNOP00000027009 | N-terminal EF-hand calcium-binding protein 1. | Protocadherin gamma subfamily A, 8. | 0.425 |
Necab1 | Pcdhgb5 | ENSRNOP00000009718 | ENSRNOP00000057212 | N-terminal EF-hand calcium-binding protein 1. | Protocadherin gamma subfamily B, 5. | 0.543 |
Necab1 | Pcdhgb8 | ENSRNOP00000009718 | ENSRNOP00000026967 | N-terminal EF-hand calcium-binding protein 1. | Protocadherin gamma subfamily B, 8. | 0.480 |
Necab1 | Sntb1 | ENSRNOP00000009718 | ENSRNOP00000006423 | N-terminal EF-hand calcium-binding protein 1. | Syntrophin, basic 1 (Predicted). | 0.444 |
Necab1 | Soga3 | ENSRNOP00000009718 | ENSRNOP00000016712 | N-terminal EF-hand calcium-binding protein 1. | SOGA family member 3. | 0.597 |
Pcdhga8 | Necab1 | ENSRNOP00000027009 | ENSRNOP00000009718 | Protocadherin gamma subfamily A, 8. | N-terminal EF-hand calcium-binding protein 1. | 0.425 |
Pcdhga8 | Sntb1 | ENSRNOP00000027009 | ENSRNOP00000006423 | Protocadherin gamma subfamily A, 8. | Syntrophin, basic 1 (Predicted). | 0.406 |
Pcdhga8 | Soga3 | ENSRNOP00000027009 | ENSRNOP00000016712 | Protocadherin gamma subfamily A, 8. | SOGA family member 3. | 0.571 |
Pcdhgb5 | Edem3 | ENSRNOP00000057212 | ENSRNOP00000017858 | Protocadherin gamma subfamily B, 5. | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | 0.439 |
Pcdhgb5 | Necab1 | ENSRNOP00000057212 | ENSRNOP00000009718 | Protocadherin gamma subfamily B, 5. | N-terminal EF-hand calcium-binding protein 1. | 0.543 |
Pcdhgb5 | Sntb1 | ENSRNOP00000057212 | ENSRNOP00000006423 | Protocadherin gamma subfamily B, 5. | Syntrophin, basic 1 (Predicted). | 0.524 |
Pcdhgb5 | Soga3 | ENSRNOP00000057212 | ENSRNOP00000016712 | Protocadherin gamma subfamily B, 5. | SOGA family member 3. | 0.691 |
Pcdhgb5 | Xpr1 | ENSRNOP00000057212 | ENSRNOP00000000049 | Protocadherin gamma subfamily B, 5. | Xenotropic and polytropic retrovirus receptor 1 (Predicted). | 0.489 |
Pcdhgb8 | Necab1 | ENSRNOP00000026967 | ENSRNOP00000009718 | Protocadherin gamma subfamily B, 8. | N-terminal EF-hand calcium-binding protein 1. | 0.480 |
Pcdhgb8 | Sntb1 | ENSRNOP00000026967 | ENSRNOP00000006423 | Protocadherin gamma subfamily B, 8. | Syntrophin, basic 1 (Predicted). | 0.440 |
Pcdhgb8 | Soga3 | ENSRNOP00000026967 | ENSRNOP00000016712 | Protocadherin gamma subfamily B, 8. | SOGA family member 3. | 0.644 |
Pcdhgb8 | Xpr1 | ENSRNOP00000026967 | ENSRNOP00000000049 | Protocadherin gamma subfamily B, 8. | Xenotropic and polytropic retrovirus receptor 1 (Predicted). | 0.403 |
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