STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Efhc1EF-hand domain-containing 1. (648 aa)    
Predicted Functional Partners:
Cfap52
Cilia and flagella-associated protein 52.
  
 
 0.889
Pacrgl
Similar to RIKEN cDNA 4933428G09 (Predicted), isoform CRA_b.
   
 
 0.849
Wdr90
WD repeat domain 90.
    
 
 0.845
Cfap45
Cilia and flagella-associated protein 45.
   
 
 0.843
Tekt1
Tektin-1; Structural component of ciliary and flagellar microtubules. Forms filamentous polymers in the walls of ciliary and flagellar microtubules (By similarity).
   
 
 0.840
Ribc2
RIB43A-like with coiled-coils protein 2; Belongs to the RIB43A family.
  
 
 0.839
Enkur
Enkurin, TRPC channel-interacting protein.
    
 
 0.809
Tekt3
Tektin-3; May be a structural component of the sperm flagellum. Required for normal sperm mobility.
   
 
 0.809
Tekt2
Tektin-2; Structural component of ciliary and flagellar microtubules. Plays a key role in the assembly or attachment of the inner dynein arm to microtubules in sperm flagella and tracheal cilia. Forms filamentous polymers in the walls of ciliary and flagellar microtubules. Belongs to the tektin family.
   
 
 0.800
Efhb
EF hand domain family, member B.
   
   0.793
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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