Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Dis3l | Exosc1 | ENSRNOP00000014071 | ENSRNOP00000067627 | DIS3-like exonuclease 1; Putative cytoplasm-specific catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. | RCG57589, isoform CRA_a. | 0.996 |
| Dis3l | Exosc4 | ENSRNOP00000014071 | ENSRNOP00000016464 | DIS3-like exonuclease 1; Putative cytoplasm-specific catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. | Exosome component 4. | 0.997 |
| Dis3l | Exosc9 | ENSRNOP00000014071 | ENSRNOP00000020662 | DIS3-like exonuclease 1; Putative cytoplasm-specific catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. | Exosome complex component RRP45; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cyto [...] | 0.998 |
| Dis3l | Mtrex | ENSRNOP00000014071 | ENSRNOP00000057426 | DIS3-like exonuclease 1; Putative cytoplasm-specific catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. | Mtr4 exosome RNA helicase. | 0.942 |
| Dis3l | Papola | ENSRNOP00000014071 | ENSRNOP00000071393 | DIS3-like exonuclease 1; Putative cytoplasm-specific catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.446 |
| Dis3l | Papolg | ENSRNOP00000014071 | ENSRNOP00000008919 | DIS3-like exonuclease 1; Putative cytoplasm-specific catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. | Poly(A) polymerase gamma (Predicted). | 0.450 |
| Dis3l | Tent4a | ENSRNOP00000014071 | ENSRNOP00000023712 | DIS3-like exonuclease 1; Putative cytoplasm-specific catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. | Polymerase (DNA directed) sigma (Predicted). | 0.604 |
| Dis3l | Tent4b | ENSRNOP00000014071 | ENSRNOP00000072094 | DIS3-like exonuclease 1; Putative cytoplasm-specific catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. | Terminal nucleotidyltransferase 4B. | 0.533 |
| Dis3l | Zcchc7 | ENSRNOP00000014071 | ENSRNOP00000017707 | DIS3-like exonuclease 1; Putative cytoplasm-specific catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. | Zinc finger CCHC domain-containing protein 7. | 0.673 |
| Exosc1 | Dis3l | ENSRNOP00000067627 | ENSRNOP00000014071 | RCG57589, isoform CRA_a. | DIS3-like exonuclease 1; Putative cytoplasm-specific catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. | 0.996 |
| Exosc1 | Exosc4 | ENSRNOP00000067627 | ENSRNOP00000016464 | RCG57589, isoform CRA_a. | Exosome component 4. | 0.999 |
| Exosc1 | Exosc9 | ENSRNOP00000067627 | ENSRNOP00000020662 | RCG57589, isoform CRA_a. | Exosome complex component RRP45; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cyto [...] | 0.999 |
| Exosc1 | Mtrex | ENSRNOP00000067627 | ENSRNOP00000057426 | RCG57589, isoform CRA_a. | Mtr4 exosome RNA helicase. | 0.985 |
| Exosc1 | Papola | ENSRNOP00000067627 | ENSRNOP00000071393 | RCG57589, isoform CRA_a. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.404 |
| Exosc1 | Papolg | ENSRNOP00000067627 | ENSRNOP00000008919 | RCG57589, isoform CRA_a. | Poly(A) polymerase gamma (Predicted). | 0.406 |
| Exosc1 | Tent4a | ENSRNOP00000067627 | ENSRNOP00000023712 | RCG57589, isoform CRA_a. | Polymerase (DNA directed) sigma (Predicted). | 0.539 |
| Exosc1 | Tent4b | ENSRNOP00000067627 | ENSRNOP00000072094 | RCG57589, isoform CRA_a. | Terminal nucleotidyltransferase 4B. | 0.577 |
| Exosc1 | Zcchc7 | ENSRNOP00000067627 | ENSRNOP00000017707 | RCG57589, isoform CRA_a. | Zinc finger CCHC domain-containing protein 7. | 0.768 |
| Exosc1 | Zcchc8 | ENSRNOP00000067627 | ENSRNOP00000001668 | RCG57589, isoform CRA_a. | Zinc finger, CCHC domain containing 8 (Predicted), isoform CRA_b. | 0.727 |
| Exosc4 | Dis3l | ENSRNOP00000016464 | ENSRNOP00000014071 | Exosome component 4. | DIS3-like exonuclease 1; Putative cytoplasm-specific catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. | 0.997 |
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