STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbl3Transducin beta-like protein 3. (800 aa)    
Predicted Functional Partners:
Pwp2
PWP2, small subunit processome component.
  
0.999
Utp18
UTP18 small subunit processome component.
   
 0.999
Utp6
UTP6 small subunit processome component.
   
 0.999
Wdr3
WD repeat domain 3 (Predicted), isoform CRA_c.
  
0.999
LOC688637
WD repeat domain 36.
   
0.999
Utp4
Cirrhosis, autosomal recessive 1A (Human).
   
 0.998
Heatr1
HEAT repeat-containing protein 1.
   
 0.998
Wdr46
WD repeat domain 46.
   
 0.997
Bms1
BMS1 ribosome biogenesis factor.
   
 0.997
Utp15
U3 small nucleolar RNA-associated protein 15 homolog; Involved in nucleolar processing of pre-18S ribosomal RNA.
  
0.997
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.