Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccin | Cylc1 | ENSRNOP00000019887 | ENSRNOP00000072824 | Calicin; Possible morphogenetic cytoskeletal element in spermiogenic differentiation. | Cylicin 1. | 0.619 |
Ccin | Cylc2 | ENSRNOP00000019887 | ENSRNOP00000033715 | Calicin; Possible morphogenetic cytoskeletal element in spermiogenic differentiation. | Cylicin_N domain-containing protein. | 0.890 |
Ccin | Dpy19l2 | ENSRNOP00000019887 | ENSRNOP00000067167 | Calicin; Possible morphogenetic cytoskeletal element in spermiogenic differentiation. | Dpy-19-like 2. | 0.441 |
Ccin | Gtf3a | ENSRNOP00000019887 | ENSRNOP00000065623 | Calicin; Possible morphogenetic cytoskeletal element in spermiogenic differentiation. | Transcription factor IIIA; Involved in ribosomal large subunit biogenesis. Binds the approximately 50 base pairs internal control region (ICR) of 5S ribosomal RNA genes. It is required for their RNA polymerase III- dependent transcription and may also maintain the transcription of other genes (By similarity). Also binds the transcribed 5S RNA's (By similarity). | 0.474 |
Ccin | Spata16 | ENSRNOP00000019887 | ENSRNOP00000033704 | Calicin; Possible morphogenetic cytoskeletal element in spermiogenic differentiation. | Spermatogenesis-associated 16. | 0.524 |
Ccin | Tnp1 | ENSRNOP00000019887 | ENSRNOP00000023769 | Calicin; Possible morphogenetic cytoskeletal element in spermiogenic differentiation. | Spermatid nuclear transition protein 1; Plays a key role in the replacement of histones to protamine in the elongating spermatids of mammals. In condensing spermatids, loaded onto the nucleosomes, where it promotes the recruitment and processing of protamines, which are responsible for histone eviction. | 0.401 |
Cylc1 | Ccin | ENSRNOP00000072824 | ENSRNOP00000019887 | Cylicin 1. | Calicin; Possible morphogenetic cytoskeletal element in spermiogenic differentiation. | 0.619 |
Cylc1 | Cylc2 | ENSRNOP00000072824 | ENSRNOP00000033715 | Cylicin 1. | Cylicin_N domain-containing protein. | 0.657 |
Cylc1 | Tnp1 | ENSRNOP00000072824 | ENSRNOP00000023769 | Cylicin 1. | Spermatid nuclear transition protein 1; Plays a key role in the replacement of histones to protamine in the elongating spermatids of mammals. In condensing spermatids, loaded onto the nucleosomes, where it promotes the recruitment and processing of protamines, which are responsible for histone eviction. | 0.469 |
Cylc2 | Ccin | ENSRNOP00000033715 | ENSRNOP00000019887 | Cylicin_N domain-containing protein. | Calicin; Possible morphogenetic cytoskeletal element in spermiogenic differentiation. | 0.890 |
Cylc2 | Cylc1 | ENSRNOP00000033715 | ENSRNOP00000072824 | Cylicin_N domain-containing protein. | Cylicin 1. | 0.657 |
Dpy19l2 | Ccin | ENSRNOP00000067167 | ENSRNOP00000019887 | Dpy-19-like 2. | Calicin; Possible morphogenetic cytoskeletal element in spermiogenic differentiation. | 0.441 |
Dpy19l2 | Spata16 | ENSRNOP00000067167 | ENSRNOP00000033704 | Dpy-19-like 2. | Spermatogenesis-associated 16. | 0.829 |
Gtf3a | Ccin | ENSRNOP00000065623 | ENSRNOP00000019887 | Transcription factor IIIA; Involved in ribosomal large subunit biogenesis. Binds the approximately 50 base pairs internal control region (ICR) of 5S ribosomal RNA genes. It is required for their RNA polymerase III- dependent transcription and may also maintain the transcription of other genes (By similarity). Also binds the transcribed 5S RNA's (By similarity). | Calicin; Possible morphogenetic cytoskeletal element in spermiogenic differentiation. | 0.474 |
Spata16 | Ccin | ENSRNOP00000033704 | ENSRNOP00000019887 | Spermatogenesis-associated 16. | Calicin; Possible morphogenetic cytoskeletal element in spermiogenic differentiation. | 0.524 |
Spata16 | Dpy19l2 | ENSRNOP00000033704 | ENSRNOP00000067167 | Spermatogenesis-associated 16. | Dpy-19-like 2. | 0.829 |
Tnp1 | Ccin | ENSRNOP00000023769 | ENSRNOP00000019887 | Spermatid nuclear transition protein 1; Plays a key role in the replacement of histones to protamine in the elongating spermatids of mammals. In condensing spermatids, loaded onto the nucleosomes, where it promotes the recruitment and processing of protamines, which are responsible for histone eviction. | Calicin; Possible morphogenetic cytoskeletal element in spermiogenic differentiation. | 0.401 |
Tnp1 | Cylc1 | ENSRNOP00000023769 | ENSRNOP00000072824 | Spermatid nuclear transition protein 1; Plays a key role in the replacement of histones to protamine in the elongating spermatids of mammals. In condensing spermatids, loaded onto the nucleosomes, where it promotes the recruitment and processing of protamines, which are responsible for histone eviction. | Cylicin 1. | 0.469 |