STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl18Mitochondrial ribosomal protein L18 (Predicted). (180 aa)    
Predicted Functional Partners:
Mrps30
Mitochondrial ribosomal protein S30 (Predicted), isoform CRA_a.
   
   0.932
Mrpl58
Mitochondrial ribosomal protein L58.
   
   0.925
Mrps25
28S ribosomal protein S25, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS25 family.
   
 
 0.902
Mrps10
28S ribosomal protein S10, mitochondrial; Belongs to the universal ribosomal protein uS10 family.
   
 
 0.902
Mrpl44
Mitochondrial ribosomal protein L44.
   
 
 0.898
Mrpl40
39S ribosomal protein L40, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL40 family.
   
   0.897
Mrpl4
Mitochondrial ribosomal protein L4 (Predicted), isoform CRA_b.
   
   0.887
Mrpl15
Mitochondrial ribosomal protein L15 (Predicted), isoform CRA_b.
   
 
 0.875
Chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1 (Predicted), isoform CRA_a.
   
   0.865
Mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
   0.864
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.