STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abhd16bProtein ABHD16B; Belongs to the AB hydrolase superfamily. ABHD16 family. (474 aa)    
Predicted Functional Partners:
Abhd18
Protein ABHD18.
      
 0.713
Abhd15
Abhydrolase domain-containing 15.
      
 0.693
Abhd2
Abhydrolase domain-containing 2.
      
 0.686
Armc3
Armadillo repeat-containing 3.
      
 0.655
Abhd12b
Abhydrolase domain-containing 12B.
      
 0.651
Tmem95
Transmembrane protein 95.
   
  
 0.648
Abhd1
Protein ABHD1.
      
 0.639
Abhd14a
Protein ABHD14A; Possible role in granule neuron development; Belongs to the AB hydrolase superfamily. ABHD14 family.
      
 0.639
Abhd8
Abhydrolase domain containing 8 (Predicted).
      
 0.638
Dgcr6
DiGeorge syndrome critical region gene 6 (Predicted), isoform CRA_b.
      
 0.633
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.