STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpd52l2Tumor protein D54. (220 aa)    
Predicted Functional Partners:
Yipf1
Protein YIPF1; Belongs to the YIP1 family.
   
  
 0.616
Zmynd19
Zinc finger MYND domain-containing protein 19; May be involved as a regulatory molecule in GPR24/MCH-R1 signaling.
   
  
 0.585
Nudt22
Uridine diphosphate glucose pyrophosphatase NUDT22; Hydrolyzes UDP-glucose to glucose 1-phosphate and UMP and UDP-galactose to galactose 1-phosphate and UMP. Preferred substrate is UDP-glucose.
   
  
 0.572
Wdr83os
Similar to cDNA sequence BC056474 (Predicted), isoform CRA_b.
   
  
 0.571
Tpd52
Tumor protein D52.
   
 
0.553
Rsrc2
Arginine/serine-rich coiled-coil protein 2; Belongs to the RSRC2 family.
   
  
 0.548
Ttc14
Tetratricopeptide repeat domain 14 (Predicted), isoform CRA_c.
    
 
 0.526
Ccdc28a
Coiled-coil domain-containing 28A.
   
  
 0.525
Tbc1d31
TBC1 domain family, member 31.
      
 0.510
Nub1
Negative regulator of ubiquitin-like proteins 1.
      
 0.506
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.