STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spryd7SPRY domain-containing protein 7. (196 aa)    
Predicted Functional Partners:
Lrrc29
Leucine-rich repeat-containing 29.
      
 0.662
RGD1564854
Similar to divalent cation tolerant protein CUTA (Predicted), isoform CRA_a.
   
  
 0.620
Amz1
Archaemetzincin-1; Zinc metalloprotease. Exhibits aminopeptidase activity against neurogranin in vitro. Does not hydrolyze angiotensin-2 (By similarity).
      
 0.588
Spryd4
SPRY domain-containing protein 4.
   
  
 0.581
Klhl32
Kelch-like family member 32.
   
  
 0.579
Sel1l3
SEL1L family member 3.
    
 
 0.572
Gfod2
Glucose-fructose oxidoreductase domain-containing 2.
      
 0.571
Ints10
Integrator complex subunit 10.
      
 0.571
Tbrg4
FAST kinase domain-containing protein 4; Plays a role in processing of mitochondrial RNA precursors and in stabilization of a subset of mature mitochondrial RNA species, such as MT-CO1, MT-CO2, MT-CYB, MT-CO3, MT-ND3, MT-ND5 and MT-ATP8/6. May play a role in cell cycle progression. Belongs to the FAST kinase family.
      
 0.544
Lysmd3
LysM and putative peptidoglycan-binding domain-containing protein 3; Essential for Golgi structural integrity.
   
  
 0.541
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.