STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcl7cB-cell CLL/lymphoma 7C (Predicted), isoform CRA_a. (217 aa)    
Predicted Functional Partners:
Ss18
SS18 subunit of BAF chromatin-remodeling complex.
   
 0.984
Smarcd1
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily d, member 1.
   
 0.962
Arid1a
AT-rich interaction domain 1A.
   
 0.948
Smarcc1
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily c, member 1.
   
 0.944
Brd9
Bromodomain-containing 9.
   
 0.938
Smarca4
Transcription activator BRG1; Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Component of SWI/SNF chromatin remodeling complexes that carry out key enzymatic activities, changing chromatin structure by altering DNA-histone contacts within a nucleosome in an ATP-dependent manner. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating the calcium- dependent release of a repressor complex and the recruitment of an activator complex. In resting ne [...]
   
 0.935
Smarca2
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily a, member 2.
    
 0.935
Smarcd2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2; Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Component of SWI/SNF chromatin remodeling complexes that carry out key enzymatic activities, changing chromatin structure by altering DNA-histone contacts within a nucleosome in an ATP-dependent manner. Critical regulator of myeloid differentiation, controlling granulocytopoiesis and the expression of genes involved in neutrophil granule formation; Belongs to [...]
   
 0.928
Smarcc2
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily c, member 2.
   
 0.922
Smarcd3
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily d, member 3.
   
 0.921
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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