Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dtna | Hmx3 | ENSRNOP00000042067 | ENSRNOP00000028007 | Dystrobrevin. | Similar to homeodomain protein (Predicted). | 0.557 |
Dtna | Ppp1r21 | ENSRNOP00000042067 | ENSRNOP00000058387 | Dystrobrevin. | Protein phosphatase 1, regulatory subunit 21. | 0.771 |
Dtnb | Hmx3 | ENSRNOP00000057536 | ENSRNOP00000028007 | Dystrobrevin beta. | Similar to homeodomain protein (Predicted). | 0.557 |
Dtnb | Ppp1r21 | ENSRNOP00000057536 | ENSRNOP00000058387 | Dystrobrevin beta. | Protein phosphatase 1, regulatory subunit 21. | 0.771 |
Gramd1b | Hmx3 | ENSRNOP00000068626 | ENSRNOP00000028007 | GRAM domain-containing 1B. | Similar to homeodomain protein (Predicted). | 0.414 |
Hinfp | Hmx3 | ENSRNOP00000012868 | ENSRNOP00000028007 | Histone H4 transcription factor. | Similar to homeodomain protein (Predicted). | 0.720 |
Hmx3 | Dtna | ENSRNOP00000028007 | ENSRNOP00000042067 | Similar to homeodomain protein (Predicted). | Dystrobrevin. | 0.557 |
Hmx3 | Dtnb | ENSRNOP00000028007 | ENSRNOP00000057536 | Similar to homeodomain protein (Predicted). | Dystrobrevin beta. | 0.557 |
Hmx3 | Gramd1b | ENSRNOP00000028007 | ENSRNOP00000068626 | Similar to homeodomain protein (Predicted). | GRAM domain-containing 1B. | 0.414 |
Hmx3 | Hinfp | ENSRNOP00000028007 | ENSRNOP00000012868 | Similar to homeodomain protein (Predicted). | Histone H4 transcription factor. | 0.720 |
Hmx3 | Isy1 | ENSRNOP00000028007 | ENSRNOP00000013571 | Similar to homeodomain protein (Predicted). | Pre-mRNA-splicing factor ISY1 homolog; Component of the spliceosome C complex required for the selective processing of microRNAs during embryonic stem cell differentiation (By similarity). Required for the biogenesis of all miRNAs from the pri-miR-17-92 primary transcript except miR-92a (By similarity). Only required for the biogenesis of miR-290 and miR-96 from the pri-miR-290-295 and pri-miR-96-183 primary transcripts, respectively (By similarity). Required during the transition of embryonic stem cells (ESCs) from the naive to primed state (By similarity). By enhancing miRNA biogenes [...] | 0.720 |
Hmx3 | Lhx6 | ENSRNOP00000028007 | ENSRNOP00000008817 | Similar to homeodomain protein (Predicted). | LIM homeobox 6. | 0.597 |
Hmx3 | Lmo4 | ENSRNOP00000028007 | ENSRNOP00000062436 | Similar to homeodomain protein (Predicted). | LIM domain only 4, isoform CRA_a. | 0.482 |
Hmx3 | Neurog1 | ENSRNOP00000028007 | ENSRNOP00000015916 | Similar to homeodomain protein (Predicted). | Neurogenin-1; Acts as a transcriptional regulator. Involved in the initiation of neuronal differentiation. Activates transcription by binding to the E box (5'-CANNTG-3'). Associates with chromatin to enhancer regulatory elements in genes encoding key transcriptional regulators of neurogenesis (By similarity). | 0.493 |
Hmx3 | Ppp1r21 | ENSRNOP00000028007 | ENSRNOP00000058387 | Similar to homeodomain protein (Predicted). | Protein phosphatase 1, regulatory subunit 21. | 0.720 |
Hmx3 | Tbx1 | ENSRNOP00000028007 | ENSRNOP00000002597 | Similar to homeodomain protein (Predicted). | T-box transcription factor 1. | 0.626 |
Isy1 | Hmx3 | ENSRNOP00000013571 | ENSRNOP00000028007 | Pre-mRNA-splicing factor ISY1 homolog; Component of the spliceosome C complex required for the selective processing of microRNAs during embryonic stem cell differentiation (By similarity). Required for the biogenesis of all miRNAs from the pri-miR-17-92 primary transcript except miR-92a (By similarity). Only required for the biogenesis of miR-290 and miR-96 from the pri-miR-290-295 and pri-miR-96-183 primary transcripts, respectively (By similarity). Required during the transition of embryonic stem cells (ESCs) from the naive to primed state (By similarity). By enhancing miRNA biogenes [...] | Similar to homeodomain protein (Predicted). | 0.720 |
Lhx6 | Hmx3 | ENSRNOP00000008817 | ENSRNOP00000028007 | LIM homeobox 6. | Similar to homeodomain protein (Predicted). | 0.597 |
Lmo4 | Hmx3 | ENSRNOP00000062436 | ENSRNOP00000028007 | LIM domain only 4, isoform CRA_a. | Similar to homeodomain protein (Predicted). | 0.482 |
Neurog1 | Hmx3 | ENSRNOP00000015916 | ENSRNOP00000028007 | Neurogenin-1; Acts as a transcriptional regulator. Involved in the initiation of neuronal differentiation. Activates transcription by binding to the E box (5'-CANNTG-3'). Associates with chromatin to enhancer regulatory elements in genes encoding key transcriptional regulators of neurogenesis (By similarity). | Similar to homeodomain protein (Predicted). | 0.493 |
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