STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ovol1Ovo-like transcriptional repressor 1. (267 aa)    
Predicted Functional Partners:
Grhl1
Grainyhead-like transcription factor 1.
   
  
 0.586
Grhl3
Transcription factor CP2-like 4 (Predicted).
   
  
 0.579
Grhl2
Grainyhead-like transcription factor 2.
   
  
 0.563
Ccdc185
Coiled-coil domain-containing 185.
      
 0.509
Actl9
Similar to actin-like 7-alpha-like protein (Predicted); Belongs to the actin family.
      
 0.478
Znf750
Zinc finger protein 750.
   
  
 0.467
Zfp414
Zinc finger protein 414; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family.
    
 
 0.462
Ripk4
Receptor-interacting serine-threonine kinase 4.
   
  
 0.443
Irf6
Interferon regulatory factor 6 (Predicted).
   
  
 0.437
Kdf1
Keratinocyte differentiation factor 1; Plays a role in the regulation of the epidermis formation during early development. Required both as an inhibitor of basal cell proliferation and a promoter of differentiation of basal progenitor cell progeny (By similarity).
   
  
 0.400
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.