STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Icam5Intercellular adhesion molecule 5. (917 aa)    
Predicted Functional Partners:
Ccser1
Coiled-coil serine-rich protein 1.
      
 0.691
Ints2
Similar to RIKEN cDNA 2810417D08 (Predicted).
      
 0.570
Trappc12
Trafficking protein particle complex 12.
      
 0.563
Tgfbr3l
Transforming growth factor, beta receptor III-like.
      
 0.558
Trappc6a
Trafficking protein particle complex 6A.
      
 0.553
Itgal
Integrin subunit alpha L; Belongs to the integrin alpha chain family.
   
 
  0.506
Itgb2
Integrin beta.
     
  0.499
Dkkl1
Dickkopf-like acrosomal protein 1.
  
     0.484
Chtf18
Chromosome transmission fidelity factor 18.
      
 0.473
Myh14
Myosin heavy chain 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.473
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.