STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl939S ribosomal protein L9, mitochondrial; Belongs to the bacterial ribosomal protein bL9 family. (262 aa)    
Predicted Functional Partners:
Mrpl19
Ribosomal protein, mitochondrial, L15.
   
 
 0.999
Mrpl27
Mitochondrial ribosomal protein L27 (Predicted), isoform CRA_a.
  
 
 0.998
Mrpl21
Mitochondrial ribosomal protein L21 (Predicted), isoform CRA_a.
  
 
 0.998
Mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.998
Mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.998
Mrpl17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.998
Mrpl12
Mitochondrial ribosomal protein L12.
   
 
 0.998
Mrps6
Mitochondrial ribosomal protein S6.
  
 
 0.998
Mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.997
Mrpl33
Brain and reproductive organ-expressed protein, isoform CRA_c.
  
 
 0.997
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.