STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GnptgN-acetylglucosamine-1-phosphotransferase, gamma subunit, isoform CRA_a. (306 aa)    
Predicted Functional Partners:
Gnptab
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.
   
 0.994
Nagpa
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
      
 0.880
Ganab
Alpha glucosidase 2 alpha neutral subunit (Predicted); Belongs to the glycosyl hydrolase 31 family.
   
 
 0.870
Ap4e1
AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system.
   
  
 0.596
Gaa
Lysosomal alpha-glucosidase; Essential for the degradation of glycogen in lysosomes. Has highest activity on alpha-1,4-linked glycosidic linkages, but can also hydrolyze alpha-1,6-linked glucans.
   
 
 0.587
Ganc
Glucosidase, alpha; neutral C; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.580
Mgam
Maltase-glucoamylase.
   
 
 0.580
RGD1561916
Similar to testes development-related NYD-SP22 isoform 1.
   
 
 0.580
Myorg
Myogenesis-regulating glycosidase; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.580
Si
Sucrase-isomaltase, intestinal; Plays an important role in the final stage of carbohydrate digestion. Isomaltase activity is specific for both alpha-1,4- and alpha-1,6-oligosaccharides; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.580
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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