STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem126aTransmembrane protein 126A. (196 aa)    
Predicted Functional Partners:
Tmem41a
Transmembrane protein 41a.
      
 0.802
Tmem109
Transmembrane protein 109; May mediate cellular response to DNA damage by protecting against ultraviolet C-induced cell death. Can form voltage-gated calcium and potassium channels in vitro.
   
  
 0.772
Rtn4ip1
Similar to NOGO-interacting mitochondrial protein (Predicted).
   
  
 0.702
Mettl17
Methyltransferase-like 17.
      
 0.695
Mettl25
Methyltransferase-like 25.
      
 0.680
Mettl7a
Methyltransferase like 7A, isoform CRA_b.
   
  
 0.674
Mettl27
Methyltransferase-like 27.
   
  
 0.661
Dhrs7
Dehydrogenase/reductase 7; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.652
Dhrs7l1
Dehydrogenase/reductase (SDR family) member 7-like 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.652
Tmem38a
Trimeric intracellular cation channel type A; Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores.
   
  
 0.646
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.