STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abca15ATP-binding cassette, subfamily A (ABC1), member 15. (1668 aa)    
Predicted Functional Partners:
Abcd4
ATP-binding cassette subfamily D member 4.
      
 0.492
Abcg3l1
ATP-binding cassette, sub-family G (WHITE), member 3-like 1.
   
  
0.477
Abcg3l3
ATP-binding cassette, subfamily G (WHITE), member 3-like 3.
   
  
0.477
Slc35b3
Solute carrier family 35 member B3.
      
 0.439
Nol8
Nucleolar protein 8 (Predicted).
      
 0.433
Nol8-2
Nucleolar protein 8.
      
 0.433
Slc45a1
Proton-associated sugar transporter A; Proton-associated glucose transporter in the brain.
      
 0.431
Slc35c2
Solute carrier family 35, member C2, isoform CRA_b.
      
 0.423
Abcf2
ATP-binding cassette subfamily F member 2.
    
 
 0.422
Slc25a31
Solute carrier family 25 member 31; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.421
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
Server load: low (36%) [HD]