Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dxo | Tsc22d4 | ENSRNOP00000000483 | ENSRNOP00000033658 | Decapping and exoribonuclease protein; Ribonuclease that specifically degrades pre-mRNAs with a defective 5' end cap and is part of a pre-mRNA capping quality control. Has decapping, pyrophosphohydrolase and 5'-3' exonuclease activities. Has decapping activity toward incomplete 5' end cap mRNAs such as unmethylated 5' end-capped RNA to release GpppN and 5' end monophosphate RNA. The 5' end monophosphate RNA is then degraded by the 5'-3' exoribonuclease activity, enabling this enzyme to decap and degrade incompletely capped mRNAs. Also possesses RNA 5'- pyrophosphohydrolase activity by [...] | TSC22 domain family protein 4; Transcriptional repressor. | 0.495 |
Nrbp1 | Tsc22d1 | ENSRNOP00000067241 | ENSRNOP00000055007 | Nuclear receptor-binding protein 1. | TSC22 domain family protein 1; Transcriptional repressor. Acts on the C-type natriuretic peptide (CNP) promoter. | 0.711 |
Nrbp1 | Tsc22d4 | ENSRNOP00000067241 | ENSRNOP00000033658 | Nuclear receptor-binding protein 1. | TSC22 domain family protein 4; Transcriptional repressor. | 0.583 |
Nrbp2 | Tsc22d4 | ENSRNOP00000068541 | ENSRNOP00000033658 | Nuclear receptor-binding protein 2. | TSC22 domain family protein 4; Transcriptional repressor. | 0.506 |
Obp2a | Tsc22d4 | ENSRNOP00000062414 | ENSRNOP00000033658 | Odorant-binding protein 2A; Belongs to the calycin superfamily. Lipocalin family. | TSC22 domain family protein 4; Transcriptional repressor. | 0.414 |
Tsc22d1 | Nrbp1 | ENSRNOP00000055007 | ENSRNOP00000067241 | TSC22 domain family protein 1; Transcriptional repressor. Acts on the C-type natriuretic peptide (CNP) promoter. | Nuclear receptor-binding protein 1. | 0.711 |
Tsc22d1 | Tsc22d4 | ENSRNOP00000055007 | ENSRNOP00000033658 | TSC22 domain family protein 1; Transcriptional repressor. Acts on the C-type natriuretic peptide (CNP) promoter. | TSC22 domain family protein 4; Transcriptional repressor. | 0.429 |
Tsc22d4 | Dxo | ENSRNOP00000033658 | ENSRNOP00000000483 | TSC22 domain family protein 4; Transcriptional repressor. | Decapping and exoribonuclease protein; Ribonuclease that specifically degrades pre-mRNAs with a defective 5' end cap and is part of a pre-mRNA capping quality control. Has decapping, pyrophosphohydrolase and 5'-3' exonuclease activities. Has decapping activity toward incomplete 5' end cap mRNAs such as unmethylated 5' end-capped RNA to release GpppN and 5' end monophosphate RNA. The 5' end monophosphate RNA is then degraded by the 5'-3' exoribonuclease activity, enabling this enzyme to decap and degrade incompletely capped mRNAs. Also possesses RNA 5'- pyrophosphohydrolase activity by [...] | 0.495 |
Tsc22d4 | Nrbp1 | ENSRNOP00000033658 | ENSRNOP00000067241 | TSC22 domain family protein 4; Transcriptional repressor. | Nuclear receptor-binding protein 1. | 0.583 |
Tsc22d4 | Nrbp2 | ENSRNOP00000033658 | ENSRNOP00000068541 | TSC22 domain family protein 4; Transcriptional repressor. | Nuclear receptor-binding protein 2. | 0.506 |
Tsc22d4 | Obp2a | ENSRNOP00000033658 | ENSRNOP00000062414 | TSC22 domain family protein 4; Transcriptional repressor. | Odorant-binding protein 2A; Belongs to the calycin superfamily. Lipocalin family. | 0.414 |
Tsc22d4 | Tsc22d1 | ENSRNOP00000033658 | ENSRNOP00000055007 | TSC22 domain family protein 4; Transcriptional repressor. | TSC22 domain family protein 1; Transcriptional repressor. Acts on the C-type natriuretic peptide (CNP) promoter. | 0.429 |
Tsc22d4 | Wdr81 | ENSRNOP00000033658 | ENSRNOP00000004365 | TSC22 domain family protein 4; Transcriptional repressor. | WD repeat-containing protein 81; Functions as a negative regulator of the PI3 kinase/PI3K activity associated with endosomal membranes via BECN1, a core subunit of the PI3K complex. By modifying the phosphatidylinositol 3- phosphate/PtdInsP3 content of endosomal membranes may regulate endosome fusion, recycling, sorting and early to late endosome transport. It is for instance, required for the delivery of cargos like BST2/tetherin from early to late endosome and thereby participates indirectly to their degradation by the lysosome. May also play a role in aggrephagy, the macroautophagic [...] | 0.438 |
Wdr81 | Tsc22d4 | ENSRNOP00000004365 | ENSRNOP00000033658 | WD repeat-containing protein 81; Functions as a negative regulator of the PI3 kinase/PI3K activity associated with endosomal membranes via BECN1, a core subunit of the PI3K complex. By modifying the phosphatidylinositol 3- phosphate/PtdInsP3 content of endosomal membranes may regulate endosome fusion, recycling, sorting and early to late endosome transport. It is for instance, required for the delivery of cargos like BST2/tetherin from early to late endosome and thereby participates indirectly to their degradation by the lysosome. May also play a role in aggrephagy, the macroautophagic [...] | TSC22 domain family protein 4; Transcriptional repressor. | 0.438 |