STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zbtb8bSimilar to Zinc finger and BTB domain containing 8 (Predicted). (482 aa)    
Predicted Functional Partners:
Olr41
Olfactory receptor.
      
 0.779
Olr72
Olfactory receptor.
      
 0.779
Olr36
Olfactory receptor.
      
 0.779
Yeats2
Similar to YEATS domain containing 2 (Predicted).
    
 
 0.598
Slc35d1
Solute carrier family 35 member D1.
      
 0.581
Olr126
Olfactory receptor.
      
 0.571
Zdhhc17
Palmitoyltransferase ZDHHC17; Palmitoyltransferase specific for a subset of neuronal proteins, including SNAP25, DLG4/PSD95, GAD2, SYT1 and HTT. May be involved in the sorting or targeting of critical proteins involved in the initiating events of endocytosis at the plasma membrane. May play a role in Mg(2+) transport; Belongs to the DHHC palmitoyltransferase family. AKR/ZDHHC17 subfamily.
    
 
 0.554
Cyp2ab1
Cytochrome P450, family 2, subfamily ab, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
 0.508
Ccdc13
Coiled-coil domain-containing 13.
      
 0.499
Fam168a
Family with sequence similarity 168, member A.
      
 0.476
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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