STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC690284Similar to F49E2.5d. (866 aa)    
Predicted Functional Partners:
Cd80
CD80 antigen, isoform CRA_a.
  
     0.490
Mepe
Matrix extracellular phosphoglycoprotein; Regulates renal phosphate excretion (By similarity). Regulates bone mineralization by osteoblasts and cartilage mineralization by chondrocytes (By similarity). Regulates the mineralization of the extracellular matrix of the craniofacial complex, such as teeth, bone and cartilage (By similarity). Increases dental pulp stem cell proliferation; Belongs to the PF07175/osteoregulin family.
  
     0.483
A1bg
Alpha-1B-glycoprotein.
  
     0.465
Prr23a
Uncharacterized protein.
  
     0.460
Spata31a5
Spermatogenesis-associated protein 31; May play a role in spermatogenesis.
  
    0.459
D3ZWF4_RAT
Uncharacterized protein.
  
     0.455
Spesp1
Sperm equatorial segment protein 1; Involved in fertilization ability of sperm.
  
    0.453
LOC100909620
Similar to BC049730 protein.
  
     0.453
RGD1564380
CD177 antigen-like.
  
     0.453
Ciart
Hypothetical gene supported by NM_017187 (Predicted), isoform CRA_a.
  
     0.446
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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