STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zbtb40Zinc finger and BTB domain-containing 40. (1254 aa)    
Predicted Functional Partners:
Zzz3
Zinc finger, ZZ-type-containing 3.
   
  
 0.679
Ccdc91
Coiled-coil domain-containing protein 91; Involved in the regulation of membrane traffic through the trans-Golgi network (TGN). Functions in close cooperation with the GGAs in the sorting of hydrolases to lysosomes.
    
 
 0.658
Asphd2
Aspartate beta-hydroxylase domain-containing protein 2; May function as 2-oxoglutarate-dependent dioxygenase.
      
 0.627
Zfp608
Zinc finger protein 608 (Predicted), isoform CRA_b.
   
  
 0.594
Rbm33
RNA-binding motif protein 33.
   
 
 0.582
Fam210a
Protein FAM210A; May play a role in the structure and strength of both muscle and bone.
      
 0.567
Phc2
Polyhomeotic-like 2 (Drosophila).
    
 
 0.564
Eml6
EMAP-like 6.
    
 
 0.541
Pate2
Prostate and testis-expressed 2.
      
 0.535
Llph
LLP homolog, long-term synaptic facilitation factor.
      
 0.510
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
Server load: low (24%) [HD]