STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SspoSCO-spondin; Involved in the modulation of neuronal aggregation. May be involved in developmental events during the formation of the central nervous system (By similarity); Belongs to the thrombospondin family. (5141 aa)    
Predicted Functional Partners:
Gp1ba
Glycoprotein Ib platelet subunit alpha.
    
 
 0.917
F8
Coagulation factor VIII; Belongs to the multicopper oxidase family.
    
 
 0.754
Tpgs1
Tubulin polyglutamylase complex subunit 1.
      
 0.691
Adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
    
 
0.688
Cldn5
Claudin-5; Plays a major role in tight junction-specific obliteration of the intercellular space.
   
  
 0.647
Ccser1
Coiled-coil serine-rich protein 1.
      
 0.614
Gp9
Glycoprotein IX (platelet).
   
 
 0.591
D3ZGS7_RAT
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.591
Fau
Ubiquitin-like protein FUBI.
   
   0.591
LOC687780
Ubiquitin-like protein fubi and ribosomal protein S30-like.
   
   0.591
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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