STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrps28Mitochondrial ribosomal protein S28. (235 aa)    
Predicted Functional Partners:
Mrps16
Mitochondrial ribosomal protein S16.
   
  0.992
Mrps22
Similar to ribosomal protein, mitochondrial, S22.
   
  0.989
Mrps2
Mitochondrial ribosomal protein S2.
   
  0.989
Mrps27
Mitochondrial ribosomal protein S27 (Predicted), isoform CRA_b.
   
  0.986
Mrps23
Mitochondrial ribosomal protein S23 (Predicted), isoform CRA_b.
   
  0.985
Mrps15
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
  0.976
Mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
  0.975
Chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1 (Predicted), isoform CRA_a.
   
  0.974
Mrps26
28S ribosomal protein S26, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS26 family.
   
 0.974
Mrps12
Mitochondrial ribosomal protein S12 (Predicted); Belongs to the universal ribosomal protein uS12 family.
   
  0.973
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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