node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Alyref | Dhx9 | ENSRNOP00000051838 | ENSRNOP00000061368 | RCG32827, isoform CRA_a. | DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Predicted). | 0.584 |
Alyref | Hnrnpc | ENSRNOP00000051838 | ENSRNOP00000070427 | RCG32827, isoform CRA_a. | Heterogeneous nuclear ribonucleoprotein C, isoform CRA_a. | 0.614 |
Alyref | Hnrnpm | ENSRNOP00000051838 | ENSRNOP00000032108 | RCG32827, isoform CRA_a. | Heterogeneous nuclear ribonucleoprotein M; Pre-mRNA binding protein, binds avidly to poly(G) and poly(U) RNA homopolymers. Involved in splicing. Acts as a receptor for carcinoembryonic antigen in Kupffer cells, may initiate a series of signaling events leading to tyrosine phosphorylation of proteins and induction of IL-1 alpha, IL-6, IL-10 and tumor necrosis factor alpha cytokines. | 0.636 |
Alyref | Hnrnpr | ENSRNOP00000051838 | ENSRNOP00000015971 | RCG32827, isoform CRA_a. | Heterogeneous nuclear ribonucleoprotein R. | 0.667 |
Alyref | Ilf2 | ENSRNOP00000051838 | ENSRNOP00000045539 | RCG32827, isoform CRA_a. | Interleukin enhancer-binding factor 2; Appears to function predominantly as a heterodimeric complex with ILF3. This complex may regulate transcription of the IL2 gene during T-cell activation. It can also promote the formation of stable DNA-dependent protein kinase holoenzyme complexes on DNA (By similarity). Essential for the efficient reshuttling of ILF3 into the nucleus (By similarity). | 0.733 |
Alyref | Ilf3 | ENSRNOP00000051838 | ENSRNOP00000073179 | RCG32827, isoform CRA_a. | Interleukin enhancer-binding factor 3; RNA-binding protein that plays an essential role in the biogenesis of circular RNAs (circRNAs) which are produced by back- splicing circularization of pre-mRNAs. Within the nucleus, promotes circRNAs processing by stabilizing the regulatory elements residing in the flanking introns of the circularized exons. Plays thereby a role in the back-splicing of a subset of circRNAs. As a consequence, participates in a wide range of transcriptional and post- transcriptional processes. Binds to poly-U elements and AU-rich elements (AREs) in the 3'-UTR of tar [...] | 0.579 |
Alyref | LOC100911576 | ENSRNOP00000051838 | ENSRNOP00000057257 | RCG32827, isoform CRA_a. | Heterogeneous nuclear ribonucleoprotein C; Binds pre-mRNA and nucleates the assembly of 40S hnRNP particles. Interacts with poly-U tracts in the 3'-UTR or 5'-UTR of mRNA and modulates the stability and the level of translation of bound mRNA molecules. Single HNRNPC tetramers bind 230-240 nucleotides. Trimers of HNRNPC tetramers bind 700 nucleotides. May play a role in the early steps of spliceosome assembly and pre-mRNA splicing. N6-methyladenosine (m6A) has been shown to alter the local structure in mRNAs and long non-coding RNAs (lncRNAs) via a mechanism named 'm(6)A-switch', facilit [...] | 0.601 |
Alyref | Srsf3 | ENSRNOP00000051838 | ENSRNOP00000000627 | RCG32827, isoform CRA_a. | Serine and arginine-rich-splicing factor 3. | 0.774 |
Alyref | Ybx1 | ENSRNOP00000051838 | ENSRNOP00000015875 | RCG32827, isoform CRA_a. | Y-box-binding protein 1; DNA- and RNA-binding protein involved in various processes, such as translational repression, RNA stabilization, mRNA splicing, DNA repair and transcription regulation. Predominantly acts as a RNA- binding protein: binds preferentially to the 5'-[CU]CUGCG-3' RNA motif and specifically recognizes mRNA transcripts modified by C5- methylcytosine (m5C). Promotes mRNA stabilization: acts by binding to m5C-containing mRNAs and recruiting the mRNA stability maintainer ELAVL1, thereby preventing mRNA decay. Component of the CRD-mediated complex that promotes MYC mRNA s [...] | 0.549 |
Alyref | Ybx1-ps3 | ENSRNOP00000051838 | ENSRNOP00000048698 | RCG32827, isoform CRA_a. | Y box protein 1 related, pseudogene 3. | 0.550 |
Dhx9 | Alyref | ENSRNOP00000061368 | ENSRNOP00000051838 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Predicted). | RCG32827, isoform CRA_a. | 0.584 |
Dhx9 | Hnrnpc | ENSRNOP00000061368 | ENSRNOP00000070427 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Predicted). | Heterogeneous nuclear ribonucleoprotein C, isoform CRA_a. | 0.849 |
Dhx9 | Hnrnpm | ENSRNOP00000061368 | ENSRNOP00000032108 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Predicted). | Heterogeneous nuclear ribonucleoprotein M; Pre-mRNA binding protein, binds avidly to poly(G) and poly(U) RNA homopolymers. Involved in splicing. Acts as a receptor for carcinoembryonic antigen in Kupffer cells, may initiate a series of signaling events leading to tyrosine phosphorylation of proteins and induction of IL-1 alpha, IL-6, IL-10 and tumor necrosis factor alpha cytokines. | 0.836 |
Dhx9 | Hnrnpr | ENSRNOP00000061368 | ENSRNOP00000015971 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Predicted). | Heterogeneous nuclear ribonucleoprotein R. | 0.748 |
Dhx9 | Ilf2 | ENSRNOP00000061368 | ENSRNOP00000045539 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Predicted). | Interleukin enhancer-binding factor 2; Appears to function predominantly as a heterodimeric complex with ILF3. This complex may regulate transcription of the IL2 gene during T-cell activation. It can also promote the formation of stable DNA-dependent protein kinase holoenzyme complexes on DNA (By similarity). Essential for the efficient reshuttling of ILF3 into the nucleus (By similarity). | 0.782 |
Dhx9 | Ilf3 | ENSRNOP00000061368 | ENSRNOP00000073179 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Predicted). | Interleukin enhancer-binding factor 3; RNA-binding protein that plays an essential role in the biogenesis of circular RNAs (circRNAs) which are produced by back- splicing circularization of pre-mRNAs. Within the nucleus, promotes circRNAs processing by stabilizing the regulatory elements residing in the flanking introns of the circularized exons. Plays thereby a role in the back-splicing of a subset of circRNAs. As a consequence, participates in a wide range of transcriptional and post- transcriptional processes. Binds to poly-U elements and AU-rich elements (AREs) in the 3'-UTR of tar [...] | 0.885 |
Dhx9 | LOC100911576 | ENSRNOP00000061368 | ENSRNOP00000057257 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Predicted). | Heterogeneous nuclear ribonucleoprotein C; Binds pre-mRNA and nucleates the assembly of 40S hnRNP particles. Interacts with poly-U tracts in the 3'-UTR or 5'-UTR of mRNA and modulates the stability and the level of translation of bound mRNA molecules. Single HNRNPC tetramers bind 230-240 nucleotides. Trimers of HNRNPC tetramers bind 700 nucleotides. May play a role in the early steps of spliceosome assembly and pre-mRNA splicing. N6-methyladenosine (m6A) has been shown to alter the local structure in mRNAs and long non-coding RNAs (lncRNAs) via a mechanism named 'm(6)A-switch', facilit [...] | 0.665 |
Dhx9 | Srsf3 | ENSRNOP00000061368 | ENSRNOP00000000627 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Predicted). | Serine and arginine-rich-splicing factor 3. | 0.732 |
Dhx9 | Ybx1 | ENSRNOP00000061368 | ENSRNOP00000015875 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Predicted). | Y-box-binding protein 1; DNA- and RNA-binding protein involved in various processes, such as translational repression, RNA stabilization, mRNA splicing, DNA repair and transcription regulation. Predominantly acts as a RNA- binding protein: binds preferentially to the 5'-[CU]CUGCG-3' RNA motif and specifically recognizes mRNA transcripts modified by C5- methylcytosine (m5C). Promotes mRNA stabilization: acts by binding to m5C-containing mRNAs and recruiting the mRNA stability maintainer ELAVL1, thereby preventing mRNA decay. Component of the CRD-mediated complex that promotes MYC mRNA s [...] | 0.960 |
Dhx9 | Ybx1-ps3 | ENSRNOP00000061368 | ENSRNOP00000048698 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Predicted). | Y box protein 1 related, pseudogene 3. | 0.859 |