STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl4Mitochondrial ribosomal protein L4 (Predicted), isoform CRA_b. (294 aa)    
Predicted Functional Partners:
Mrpl17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.996
Mrpl19
Ribosomal protein, mitochondrial, L15.
   
 
 0.995
Mrpl21
Mitochondrial ribosomal protein L21 (Predicted), isoform CRA_a.
   
 
 0.995
Mrpl13
Mitochondrial ribosomal protein L13, isoform CRA_a.
  
 
 0.994
Mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.994
Rpl23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.991
Mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.991
mrpl11
39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.991
Mrpl33
Brain and reproductive organ-expressed protein, isoform CRA_c.
  
 
 0.991
mrpl24
39S ribosomal protein L24, mitochondrial; Belongs to the universal ribosomal protein uL24 family.
  
 
 0.991
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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