Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Dux4 | Mbd3l2 | ENSRNOP00000044374 | ENSRNOP00000037810 | Double homeobox 4. | Uncharacterized protein. | 0.614 |
| Dux4 | Trim42 | ENSRNOP00000044374 | ENSRNOP00000066659 | Double homeobox 4. | Tripartite motif-containing 42. | 0.450 |
| Dux4 | Trim43a | ENSRNOP00000044374 | ENSRNOP00000046722 | Double homeobox 4. | Tripartite motif-containing 43A. | 0.545 |
| Mbd3l2 | Dux4 | ENSRNOP00000037810 | ENSRNOP00000044374 | Uncharacterized protein. | Double homeobox 4. | 0.614 |
| Mbd3l2 | Trim43a | ENSRNOP00000037810 | ENSRNOP00000046722 | Uncharacterized protein. | Tripartite motif-containing 43A. | 0.562 |
| Pcnt | Trim43a | ENSRNOP00000039329 | ENSRNOP00000046722 | Pericentrin. | Tripartite motif-containing 43A. | 0.420 |
| Trim23 | Trim25 | ENSRNOP00000016597 | ENSRNOP00000052533 | E3 ubiquitin-protein ligase TRIM23; Acts as an E3 ubiquitin-protein ligase. Plays an essential role in autophagy activation during viral infection. Mechanistically, activates TANK-binding kinase 1/TBK1 by facilitating its dimerization and ability to phosphorylate the selective autophagy receptor SQSTM1. In order to achieve this function, TRIM23 mediates 'Lys-27'-linked auto-ubiquitination of its ADP-ribosylation factor (ARF) domain to induce its GTPase activity and its recruitment to autophagosomes. | Tripartite motif-containing 25. | 0.517 |
| Trim23 | Trim42 | ENSRNOP00000016597 | ENSRNOP00000066659 | E3 ubiquitin-protein ligase TRIM23; Acts as an E3 ubiquitin-protein ligase. Plays an essential role in autophagy activation during viral infection. Mechanistically, activates TANK-binding kinase 1/TBK1 by facilitating its dimerization and ability to phosphorylate the selective autophagy receptor SQSTM1. In order to achieve this function, TRIM23 mediates 'Lys-27'-linked auto-ubiquitination of its ADP-ribosylation factor (ARF) domain to induce its GTPase activity and its recruitment to autophagosomes. | Tripartite motif-containing 42. | 0.668 |
| Trim23 | Trim43a | ENSRNOP00000016597 | ENSRNOP00000046722 | E3 ubiquitin-protein ligase TRIM23; Acts as an E3 ubiquitin-protein ligase. Plays an essential role in autophagy activation during viral infection. Mechanistically, activates TANK-binding kinase 1/TBK1 by facilitating its dimerization and ability to phosphorylate the selective autophagy receptor SQSTM1. In order to achieve this function, TRIM23 mediates 'Lys-27'-linked auto-ubiquitination of its ADP-ribosylation factor (ARF) domain to induce its GTPase activity and its recruitment to autophagosomes. | Tripartite motif-containing 43A. | 0.461 |
| Trim23 | Trim47 | ENSRNOP00000016597 | ENSRNOP00000010887 | E3 ubiquitin-protein ligase TRIM23; Acts as an E3 ubiquitin-protein ligase. Plays an essential role in autophagy activation during viral infection. Mechanistically, activates TANK-binding kinase 1/TBK1 by facilitating its dimerization and ability to phosphorylate the selective autophagy receptor SQSTM1. In order to achieve this function, TRIM23 mediates 'Lys-27'-linked auto-ubiquitination of its ADP-ribosylation factor (ARF) domain to induce its GTPase activity and its recruitment to autophagosomes. | Similar to Tripartite motif protein 47. | 0.506 |
| Trim23 | Trim66 | ENSRNOP00000016597 | ENSRNOP00000019368 | E3 ubiquitin-protein ligase TRIM23; Acts as an E3 ubiquitin-protein ligase. Plays an essential role in autophagy activation during viral infection. Mechanistically, activates TANK-binding kinase 1/TBK1 by facilitating its dimerization and ability to phosphorylate the selective autophagy receptor SQSTM1. In order to achieve this function, TRIM23 mediates 'Lys-27'-linked auto-ubiquitination of its ADP-ribosylation factor (ARF) domain to induce its GTPase activity and its recruitment to autophagosomes. | Tripartite motif-containing 66. | 0.535 |
| Trim23 | Trim80 | ENSRNOP00000016597 | ENSRNOP00000060665 | E3 ubiquitin-protein ligase TRIM23; Acts as an E3 ubiquitin-protein ligase. Plays an essential role in autophagy activation during viral infection. Mechanistically, activates TANK-binding kinase 1/TBK1 by facilitating its dimerization and ability to phosphorylate the selective autophagy receptor SQSTM1. In order to achieve this function, TRIM23 mediates 'Lys-27'-linked auto-ubiquitination of its ADP-ribosylation factor (ARF) domain to induce its GTPase activity and its recruitment to autophagosomes. | Tripartite motif protein 80. | 0.501 |
| Trim25 | Trim23 | ENSRNOP00000052533 | ENSRNOP00000016597 | Tripartite motif-containing 25. | E3 ubiquitin-protein ligase TRIM23; Acts as an E3 ubiquitin-protein ligase. Plays an essential role in autophagy activation during viral infection. Mechanistically, activates TANK-binding kinase 1/TBK1 by facilitating its dimerization and ability to phosphorylate the selective autophagy receptor SQSTM1. In order to achieve this function, TRIM23 mediates 'Lys-27'-linked auto-ubiquitination of its ADP-ribosylation factor (ARF) domain to induce its GTPase activity and its recruitment to autophagosomes. | 0.517 |
| Trim25 | Trim43a | ENSRNOP00000052533 | ENSRNOP00000046722 | Tripartite motif-containing 25. | Tripartite motif-containing 43A. | 0.438 |
| Trim42 | Dux4 | ENSRNOP00000066659 | ENSRNOP00000044374 | Tripartite motif-containing 42. | Double homeobox 4. | 0.450 |
| Trim42 | Trim23 | ENSRNOP00000066659 | ENSRNOP00000016597 | Tripartite motif-containing 42. | E3 ubiquitin-protein ligase TRIM23; Acts as an E3 ubiquitin-protein ligase. Plays an essential role in autophagy activation during viral infection. Mechanistically, activates TANK-binding kinase 1/TBK1 by facilitating its dimerization and ability to phosphorylate the selective autophagy receptor SQSTM1. In order to achieve this function, TRIM23 mediates 'Lys-27'-linked auto-ubiquitination of its ADP-ribosylation factor (ARF) domain to induce its GTPase activity and its recruitment to autophagosomes. | 0.668 |
| Trim42 | Trim43a | ENSRNOP00000066659 | ENSRNOP00000046722 | Tripartite motif-containing 42. | Tripartite motif-containing 43A. | 0.586 |
| Trim42 | Trim47 | ENSRNOP00000066659 | ENSRNOP00000010887 | Tripartite motif-containing 42. | Similar to Tripartite motif protein 47. | 0.649 |
| Trim42 | Trim66 | ENSRNOP00000066659 | ENSRNOP00000019368 | Tripartite motif-containing 42. | Tripartite motif-containing 66. | 0.646 |
| Trim42 | Trim80 | ENSRNOP00000066659 | ENSRNOP00000060665 | Tripartite motif-containing 42. | Tripartite motif protein 80. | 0.420 |
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