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Pabpn1l protein (Rattus norvegicus) - STRING interaction network
"Pabpn1l" - Embryonic polyadenylate-binding protein 2 in Rattus norvegicus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Pabpn1lEmbryonic polyadenylate-binding protein 2; Binds the poly(A) tail of mRNA (269 aa)    
Predicted Functional Partners:
Pabpn1
poly(A) binding protein, nuclear 1 (302 aa)
   
   
0.810
Pnn
Pinin, desmosome associated protein (729 aa)
     
 
  0.758
Pabpc1
Polyadenylate-binding protein 1; Binds the poly(A) tail of mRNA, including that of its own transcript. May be involved in cytoplasmic regulatory processes of mRNA metabolism such as pre-mRNA splicing. Its function in translational initiation regulation can either be enhanced by PAIP1 or repressed by PAIP2. Can probably bind to cytoplasmic RNA sequences other than poly(A) in vivo. Involved in translationally coupled mRNA turnover. Implicated with other RNA- binding proteins in the cytoplasmic deadenylation/translational and decay interplay of the FOS mRNA mediated by the major coding- r [...] (636 aa)
     
 
  0.742
Acin1
Apoptotic chromatin condensation inducer 1 (1339 aa)
     
 
  0.717
Eif4a3
Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all s [...] (411 aa)
     
 
  0.696
Rbm27
RNA binding motif protein 27 (1040 aa)
     
 
  0.694
Rbm26
RNA binding motif protein 26 (1012 aa)
     
 
  0.694
Bcl2l2
RCG23437, isoform CRA_b; Bcl2-like 2 (193 aa)
 
   
 
  0.690
Cstf2
Cleavage stimulation factor, 3’ pre-RNA subunit 2 (560 aa)
     
 
0.669
Cstf2t
Cleavage stimulation factor, 3’ pre-RNA, subunit 2, 64kDa, tau variant (629 aa)
     
 
0.668
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Gunn rats, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus norvegicus, Rattus rattiscus, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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