Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arsa | Galc | ENSRNOP00000017782 | ENSRNOP00000005015 | Arylsulfatase A, isoform CRA_a. | Galactosylceramidase. | 0.968 |
Arsa | Gla | ENSRNOP00000017782 | ENSRNOP00000015494 | Arylsulfatase A, isoform CRA_a. | Alpha-galactosidase. | 0.945 |
Arsa | Glb1 | ENSRNOP00000017782 | ENSRNOP00000013632 | Arylsulfatase A, isoform CRA_a. | Beta-galactosidase. | 0.512 |
Arsa | Neu1 | ENSRNOP00000017782 | ENSRNOP00000050614 | Arylsulfatase A, isoform CRA_a. | Sialidase-1; Catalyzes the removal of sialic acid (N-acetylneuraminic acid) moieties from glycoproteins and glycolipids. To be active, it is strictly dependent on its presence in the multienzyme complex. Appears to have a preference for alpha 2-3 and alpha 2-6 sialyl linkage. | 0.929 |
Arsa | Neu4 | ENSRNOP00000017782 | ENSRNOP00000063883 | Arylsulfatase A, isoform CRA_a. | Sialidase 4 (Predicted). | 0.920 |
Arsa | Ugt8 | ENSRNOP00000017782 | ENSRNOP00000012676 | Arylsulfatase A, isoform CRA_a. | 2-hydroxyacylsphingosine 1-beta-galactosyltransferase; Catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. | 0.951 |
Ctsa | Glb1 | ENSRNOP00000062425 | ENSRNOP00000013632 | Carboxypeptidase; Belongs to the peptidase S10 family. | Beta-galactosidase. | 0.995 |
Ctsa | Neu1 | ENSRNOP00000062425 | ENSRNOP00000050614 | Carboxypeptidase; Belongs to the peptidase S10 family. | Sialidase-1; Catalyzes the removal of sialic acid (N-acetylneuraminic acid) moieties from glycoproteins and glycolipids. To be active, it is strictly dependent on its presence in the multienzyme complex. Appears to have a preference for alpha 2-3 and alpha 2-6 sialyl linkage. | 0.993 |
Ctsa | Neu4 | ENSRNOP00000062425 | ENSRNOP00000063883 | Carboxypeptidase; Belongs to the peptidase S10 family. | Sialidase 4 (Predicted). | 0.791 |
Ercc3 | Neu1 | ENSRNOP00000018422 | ENSRNOP00000050614 | General transcription and DNA repair factor IIH helicase subunit XPB; ATP-dependent 3'-5' DNA helicase, component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. The ATPase activity of XPB/ERCC3, but not its helicase activity, is required fo [...] | Sialidase-1; Catalyzes the removal of sialic acid (N-acetylneuraminic acid) moieties from glycoproteins and glycolipids. To be active, it is strictly dependent on its presence in the multienzyme complex. Appears to have a preference for alpha 2-3 and alpha 2-6 sialyl linkage. | 0.827 |
Gal3st1 | Galc | ENSRNOP00000062589 | ENSRNOP00000005015 | Galactose-3-O-sulfotransferase 1. | Galactosylceramidase. | 0.928 |
Gal3st1 | Gla | ENSRNOP00000062589 | ENSRNOP00000015494 | Galactose-3-O-sulfotransferase 1. | Alpha-galactosidase. | 0.900 |
Gal3st1 | Hexa | ENSRNOP00000062589 | ENSRNOP00000013747 | Galactose-3-O-sulfotransferase 1. | Beta-hexosaminidase subunit alpha; Responsible for the degradation of GM2 gangliosides, and a variety of other molecules containing terminal N-acetyl hexosamines, in the brain and other tissues. | 0.463 |
Gal3st1 | Neu1 | ENSRNOP00000062589 | ENSRNOP00000050614 | Galactose-3-O-sulfotransferase 1. | Sialidase-1; Catalyzes the removal of sialic acid (N-acetylneuraminic acid) moieties from glycoproteins and glycolipids. To be active, it is strictly dependent on its presence in the multienzyme complex. Appears to have a preference for alpha 2-3 and alpha 2-6 sialyl linkage. | 0.928 |
Gal3st1 | Neu4 | ENSRNOP00000062589 | ENSRNOP00000063883 | Galactose-3-O-sulfotransferase 1. | Sialidase 4 (Predicted). | 0.929 |
Gal3st1 | Ugt8 | ENSRNOP00000062589 | ENSRNOP00000012676 | Galactose-3-O-sulfotransferase 1. | 2-hydroxyacylsphingosine 1-beta-galactosyltransferase; Catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. | 0.955 |
Galc | Arsa | ENSRNOP00000005015 | ENSRNOP00000017782 | Galactosylceramidase. | Arylsulfatase A, isoform CRA_a. | 0.968 |
Galc | Gal3st1 | ENSRNOP00000005015 | ENSRNOP00000062589 | Galactosylceramidase. | Galactose-3-O-sulfotransferase 1. | 0.928 |
Galc | Gla | ENSRNOP00000005015 | ENSRNOP00000015494 | Galactosylceramidase. | Alpha-galactosidase. | 0.943 |
Galc | Glb1 | ENSRNOP00000005015 | ENSRNOP00000013632 | Galactosylceramidase. | Beta-galactosidase. | 0.539 |
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