STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zfp652Zinc finger protein 652; Functions as a transcriptional repressor. (608 aa)    
Predicted Functional Partners:
Satl1
Spermidine/spermine N1-acetyl transferase-like 1.
    
 
 0.711
Plcd3
Phosphoinositide phospholipase C.
    
 
 0.621
Gucd1
Guanylyl cyclase domain-containing 1.
      
 0.549
Sh2b3
SH2B adapter protein 3; Links T-cell receptor activation signal to phospholipase C- gamma-1, GRB2 and phosphatidylinositol 3-kinase; Belongs to the SH2B adapter family.
   
  
 0.540
Cbfa2t3
Core-binding factor, runt domain, alpha subunit 2; translocated to, 3 (Predicted).
   
 
 0.495
Huwe1
E3 ubiquitin-protein ligase HUWE1.
    
   0.493
Btbd18
BTB domain-containing 18.
    
 
 0.474
Clec2h
C-type lectin domain-containing protein.
    
 
 0.414
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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