Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D3ZGS7_RAT | Fau | ENSRNOP00000017230 | ENSRNOP00000028481 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ubiquitin-like protein FUBI. | 0.932 |
D3ZGS7_RAT | LOC687780 | ENSRNOP00000017230 | ENSRNOP00000034657 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ubiquitin-like protein fubi and ribosomal protein S30-like. | 0.860 |
D3ZGS7_RAT | LOC687780-2 | ENSRNOP00000017230 | ENSRNOP00000042031 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | FAU, ubiquitin like and ribosomal protein S30 fusion. | 0.860 |
D3ZGS7_RAT | Rpl18 | ENSRNOP00000017230 | ENSRNOP00000028555 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 60S ribosomal protein L18; Component of the large ribosomal subunit. | 0.997 |
D3ZGS7_RAT | Rpl4 | ENSRNOP00000017230 | ENSRNOP00000013462 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 60S ribosomal protein L4; Belongs to the universal ribosomal protein uL4 family. | 0.996 |
D3ZGS7_RAT | Rplp0 | ENSRNOP00000017230 | ENSRNOP00000001518 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 0.992 |
D3ZGS7_RAT | Rplp0l1 | ENSRNOP00000017230 | ENSRNOP00000046157 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 0.992 |
D3ZGS7_RAT | Rplp1 | ENSRNOP00000017230 | ENSRNOP00000018820 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 60S acidic ribosomal protein P1; Plays an important role in the elongation step of protein synthesis; Belongs to the eukaryotic ribosomal protein P1/P2 family. | 0.991 |
D3ZGS7_RAT | Rplp2 | ENSRNOP00000017230 | ENSRNOP00000053863 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 60S acidic ribosomal protein P2-like. | 0.963 |
D3ZGS7_RAT | Rps5 | ENSRNOP00000017230 | ENSRNOP00000026528 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 40S ribosomal protein S5, N-terminally processed; Belongs to the universal ribosomal protein uS7 family. | 0.996 |
Fau | D3ZGS7_RAT | ENSRNOP00000028481 | ENSRNOP00000017230 | Ubiquitin-like protein FUBI. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.932 |
Fau | LOC687780 | ENSRNOP00000028481 | ENSRNOP00000034657 | Ubiquitin-like protein FUBI. | Ubiquitin-like protein fubi and ribosomal protein S30-like. | 0.970 |
Fau | LOC687780-2 | ENSRNOP00000028481 | ENSRNOP00000042031 | Ubiquitin-like protein FUBI. | FAU, ubiquitin like and ribosomal protein S30 fusion. | 0.970 |
Fau | Rpl18 | ENSRNOP00000028481 | ENSRNOP00000028555 | Ubiquitin-like protein FUBI. | 60S ribosomal protein L18; Component of the large ribosomal subunit. | 0.999 |
Fau | Rpl4 | ENSRNOP00000028481 | ENSRNOP00000013462 | Ubiquitin-like protein FUBI. | 60S ribosomal protein L4; Belongs to the universal ribosomal protein uL4 family. | 0.999 |
Fau | Rplp0 | ENSRNOP00000028481 | ENSRNOP00000001518 | Ubiquitin-like protein FUBI. | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 0.993 |
Fau | Rplp0l1 | ENSRNOP00000028481 | ENSRNOP00000046157 | Ubiquitin-like protein FUBI. | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 0.992 |
Fau | Rplp1 | ENSRNOP00000028481 | ENSRNOP00000018820 | Ubiquitin-like protein FUBI. | 60S acidic ribosomal protein P1; Plays an important role in the elongation step of protein synthesis; Belongs to the eukaryotic ribosomal protein P1/P2 family. | 0.992 |
Fau | Rplp2 | ENSRNOP00000028481 | ENSRNOP00000053863 | Ubiquitin-like protein FUBI. | 60S acidic ribosomal protein P2-like. | 0.965 |
Fau | Rps5 | ENSRNOP00000028481 | ENSRNOP00000026528 | Ubiquitin-like protein FUBI. | 40S ribosomal protein S5, N-terminally processed; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
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