Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0G2K3L0_RAT | Pcdh20 | ENSRNOP00000072682 | ENSRNOP00000017765 | Uncharacterized protein. | Protocadherin 20 (Predicted). | 0.440 |
A0A0G2K3L0_RAT | Pcdh9 | ENSRNOP00000072682 | ENSRNOP00000054733 | Uncharacterized protein. | Protocadherin 9. | 0.644 |
A0A0G2K3L0_RAT | Ppp1r10 | ENSRNOP00000072682 | ENSRNOP00000072634 | Uncharacterized protein. | Serine/threonine-protein phosphatase 1 regulatory subunit 10; Scaffold protein which mediates the formation of the PTW/PP1 phosphatase complex by providing a binding platform to each component of the complex. The PTW/PP1 phosphatase complex plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase. Mediates interaction of WDR82 and PPP1CA. Inhibitor of PPP1CA and PPP1CC phosphatase activities. Has inhibitory activity on PPP1CA only when phosphorylated. Binds to mRNA, single-stranded DNA (ssDNA), poly(A) and poly(G) [...] | 0.410 |
A0A0G2K3L0_RAT | Setd4 | ENSRNOP00000072682 | ENSRNOP00000002308 | Uncharacterized protein. | SET domain-containing 4. | 0.434 |
A0A0G2K3L0_RAT | Slc5a7 | ENSRNOP00000072682 | ENSRNOP00000014548 | Uncharacterized protein. | High affinity choline transporter 1; Transmembrane transporter that imports choline from the extracellular space to the neuron with high affinity. Choline uptake is the rate-limiting step in acetylcholine synthesis. Sodium ion- and chloride ion-dependent; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.436 |
A0A0G2K3L0_RAT | St6gal2 | ENSRNOP00000072682 | ENSRNOP00000071786 | Uncharacterized protein. | Beta-galactoside alpha-2,6-sialyltransferase 2; Transfers sialic acid from the donor of substrate CMP-sialic acid to galactose containing acceptor substrates. Has alpha-2,6- sialyltransferase activity toward oligosaccharides that have the Gal- beta-1,4-GlcNAc sequence at the non-reducing end of their carbohydrate groups, but it has weak or no activities toward glycoproteins and glycolipids. | 0.411 |
Cntn4 | Pcdh9 | ENSRNOP00000007788 | ENSRNOP00000054733 | Contactin-4; Contactins mediate cell surface interactions during nervous system development. Has some neurite outgrowth-promoting activity. May be involved in synaptogenesis; Belongs to the immunoglobulin superfamily. Contactin family. | Protocadherin 9. | 0.443 |
Pcdh20 | A0A0G2K3L0_RAT | ENSRNOP00000017765 | ENSRNOP00000072682 | Protocadherin 20 (Predicted). | Uncharacterized protein. | 0.440 |
Pcdh20 | Pcdh9 | ENSRNOP00000017765 | ENSRNOP00000054733 | Protocadherin 20 (Predicted). | Protocadherin 9. | 0.444 |
Pcdh9 | A0A0G2K3L0_RAT | ENSRNOP00000054733 | ENSRNOP00000072682 | Protocadherin 9. | Uncharacterized protein. | 0.644 |
Pcdh9 | Cntn4 | ENSRNOP00000054733 | ENSRNOP00000007788 | Protocadherin 9. | Contactin-4; Contactins mediate cell surface interactions during nervous system development. Has some neurite outgrowth-promoting activity. May be involved in synaptogenesis; Belongs to the immunoglobulin superfamily. Contactin family. | 0.443 |
Pcdh9 | Pcdh20 | ENSRNOP00000054733 | ENSRNOP00000017765 | Protocadherin 9. | Protocadherin 20 (Predicted). | 0.444 |
Pcdh9 | Ppp1r10 | ENSRNOP00000054733 | ENSRNOP00000072634 | Protocadherin 9. | Serine/threonine-protein phosphatase 1 regulatory subunit 10; Scaffold protein which mediates the formation of the PTW/PP1 phosphatase complex by providing a binding platform to each component of the complex. The PTW/PP1 phosphatase complex plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase. Mediates interaction of WDR82 and PPP1CA. Inhibitor of PPP1CA and PPP1CC phosphatase activities. Has inhibitory activity on PPP1CA only when phosphorylated. Binds to mRNA, single-stranded DNA (ssDNA), poly(A) and poly(G) [...] | 0.462 |
Pcdh9 | Ralyl | ENSRNOP00000054733 | ENSRNOP00000015195 | Protocadherin 9. | RALY RNA-binding protein-like. | 0.430 |
Pcdh9 | Setd4 | ENSRNOP00000054733 | ENSRNOP00000002308 | Protocadherin 9. | SET domain-containing 4. | 0.553 |
Pcdh9 | Slc37a3 | ENSRNOP00000054733 | ENSRNOP00000011915 | Protocadherin 9. | Solute carrier family 37 (Glycerol-3-phosphate transporter), member 3 (Predicted), isoform CRA_b. | 0.525 |
Pcdh9 | Slc5a7 | ENSRNOP00000054733 | ENSRNOP00000014548 | Protocadherin 9. | High affinity choline transporter 1; Transmembrane transporter that imports choline from the extracellular space to the neuron with high affinity. Choline uptake is the rate-limiting step in acetylcholine synthesis. Sodium ion- and chloride ion-dependent; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.514 |
Pcdh9 | St6gal2 | ENSRNOP00000054733 | ENSRNOP00000071786 | Protocadherin 9. | Beta-galactoside alpha-2,6-sialyltransferase 2; Transfers sialic acid from the donor of substrate CMP-sialic acid to galactose containing acceptor substrates. Has alpha-2,6- sialyltransferase activity toward oligosaccharides that have the Gal- beta-1,4-GlcNAc sequence at the non-reducing end of their carbohydrate groups, but it has weak or no activities toward glycoproteins and glycolipids. | 0.570 |
Pcdh9 | Trmt9b | ENSRNOP00000054733 | ENSRNOP00000015062 | Protocadherin 9. | Similar to 6430573F11Rik protein (Predicted), isoform CRA_d. | 0.430 |
Ppp1r10 | A0A0G2K3L0_RAT | ENSRNOP00000072634 | ENSRNOP00000072682 | Serine/threonine-protein phosphatase 1 regulatory subunit 10; Scaffold protein which mediates the formation of the PTW/PP1 phosphatase complex by providing a binding platform to each component of the complex. The PTW/PP1 phosphatase complex plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase. Mediates interaction of WDR82 and PPP1CA. Inhibitor of PPP1CA and PPP1CC phosphatase activities. Has inhibitory activity on PPP1CA only when phosphorylated. Binds to mRNA, single-stranded DNA (ssDNA), poly(A) and poly(G) [...] | Uncharacterized protein. | 0.410 |
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