STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsc22d1TSC22 domain family protein 1; Transcriptional repressor. Acts on the C-type natriuretic peptide (CNP) promoter. (1050 aa)    
Predicted Functional Partners:
Nrbp1
Nuclear receptor-binding protein 1.
   
 
 0.711
C12H7orf61-2
Uncharacterized protein.
    
 
0.688
A0A0G2K0U9_RAT
Uncharacterized protein.
    
 
 0.514
Cinp
Similar to cyclin-dependent kinase 2-interacting protein (Predicted), isoform CRA_a.
      
 0.505
Cgrrf1
Cell growth regulator with RING finger domain protein 1; Able to inhibit growth in several cell lines.
   
  
 0.496
Ppp1r12b
Protein phosphatase 1 regulatory subunit.
   
  
 0.484
Ccdc60
Coiled-coil domain-containing protein 60.
      
 0.467
Rbm12b
RNA-binding motif protein 12B.
      
 0.463
Actg2
Actin, gamma-enteric smooth muscle, intermediate form; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
   
  
 0.449
Tsc22d4
TSC22 domain family protein 4; Transcriptional repressor.
    
 
0.429
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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