STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CtsgCathepsin G. (250 aa)    
Predicted Functional Partners:
Mpo
Myeloperoxidase.
   
 
 0.999
Mmp9
Matrix metalloproteinase-9; Could play a role in bone osteoclastic resorption. Cleaves type IV and type V collagen into large C-terminal three quarter fragments and shorter N-terminal one quarter fragments (By similarity). Belongs to the peptidase M10A family.
   
 
 0.969
Prtn3
Proteinase 3 (Predicted); Belongs to the peptidase S1 family.
  
 
0.959
Elane
Elastase 2, neutrophil (Predicted); Belongs to the peptidase S1 family.
  
 
0.951
Serpinb3a
Serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3A; Belongs to the serpin family.
    
 0.932
Serpinb3
Serpin family B member 3; Belongs to the serpin family.
    
 0.928
Serpinb6a
Serine (Or cysteine) peptidase inhibitor, clade B, member 6a, isoform CRA_a; Belongs to the serpin family.
    
 0.926
Serpinb6b
Serine (or cysteine) peptidase inhibitor, clade B, member 6b; Belongs to the serpin family.
    
 0.921
Serpinb9
Serine (Or cysteine) peptidase inhibitor, clade B, member 9; Belongs to the serpin family.
    
 0.920
Serpinb13
Serine (Or cysteine) peptidase inhibitor, clade B (Ovalbumin), member 13 (Predicted); Belongs to the serpin family.
    
 0.918
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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